Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 398 a.a., drug resistance transporter, Bcr/CflA family protein from Marinobacter adhaerens HP15

 Score =  154 bits (388), Expect = 6e-42
 Identities = 109/390 (27%), Positives = 190/390 (48%), Gaps = 11/390 (2%)

Query: 4   SFFQ--LVYLSALSMLGFIATDMYLPAFKMMETAFATGPEQIALSLTVFLVGMALGQLLW 61
           SFF   L  L+ L+ L  ++ D+YLPAF  +  +      QI ++L  +L+GMA+GQLL+
Sbjct: 8   SFFPGWLFLLAMLTALSPLSVDLYLPAFPAIAESLNVNSAQIQVTLAAYLLGMAVGQLLY 67

Query: 62  GLASDKFGHRNTLIAGLLVFTLASAGLAFSSTVWQLLLLRFIQAIGVCAPAVIWQAMVIK 121
           G  SD FG +  L  GL ++ LAS    F+S +  L + RF+QA+G  +  VI +A++  
Sbjct: 68  GPLSDHFGRKPPLYFGLALYVLASFACVFASDLTTLTIARFVQALGGSSGVVISRAVIRD 127

Query: 122 RYPSSVSQQLFATIMPLVALSPALAPQLGVLLADYFGWHSIFLTLTLMGIVLVVST--GL 179
           R   + S + F+ +M  + L+P LAP LG  L    GW  IF  L + GIVL +ST   +
Sbjct: 128 RTKPAQSAKAFSMLMLALGLAPILAPLLGGFLLYIMGWRGIFAVLGVTGIVLFISTHYSM 187

Query: 180 QTNEIAEPKT----TSIAQDIKGLLKSKTYLGNVMMFACASAAFFAYLTGMPEIMAQL-G 234
           +     EP       S+      LL+   +   V++        FAY+ G P I+ +L  
Sbjct: 188 RETHFREPNAHLSLWSVLTRYLELLREWQFQKYVLVAGMLFGGMFAYVAGSPFIVIELFE 247

Query: 235 YQARDIGLSFIPQTIAFMVGGYLGKKAVQKYGDELVLKQLIALFTLSAAMIFVASQWTLS 294
                 G  F    I  + G  +      +YG E VLK +I +  +++ + F ++     
Sbjct: 248 VPPEHFGWFFGINAIGMIAGSQINANLATRYGPEKVLKHVIWIPFVASLLGFSSAVLQFD 307

Query: 295 SIWPILAPFCLIAVANGAMYPIVVNRALSSAKQSPATAAGLQNSLQISVSSLSSALVAAM 354
           S+  ++  F     + G + P  +  A++S      +A+ +  ++Q  + +L + +++  
Sbjct: 308 SLPLLMLCFFAFMTSMGLLSPNAMALAMASQGHRAGSASAIMGAIQFLIGTLGATVISFW 367

Query: 355 -ASQAQPVTGIAIVLCTGGLWLGYVLSNRT 383
               A P+  + ++   G L+  ++L  +T
Sbjct: 368 PLPSAVPLMTVMLISTAGSLFF-FLLGKKT 396