Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 399 a.a., Inner membrane transport protein YdhC from Enterobacter sp. TBS_079

 Score =  301 bits (772), Expect = 2e-86
 Identities = 165/381 (43%), Positives = 237/381 (62%), Gaps = 1/381 (0%)

Query: 8   LVYLSALSMLGFIATDMYLPAFKMMETAFATGPEQIALSLTVFLVGMALGQLLWGLASDK 67
           LV+L  LS+LGF+ATDMYLPAF  M+    T    I+ SL++FL G A  QLLWG  SD+
Sbjct: 8   LVWLGGLSVLGFLATDMYLPAFAAMQEDLQTPAAAISASLSLFLAGFAFAQLLWGPLSDR 67

Query: 68  FGHRNTLIAGLLVFTLASAGLAFSSTVWQLLLLRFIQAIGVCAPAVIWQAMVIKRYPSSV 127
           FG +  L+ GL +F +   G+ +      LL+LRF+QA+GVCA AV WQA+V   YP++ 
Sbjct: 68  FGRKPVLLLGLAIFAVGCLGMLWVRDATWLLVLRFVQAVGVCAAAVTWQALVTDYYPANR 127

Query: 128 SQQLFATIMPLVALSPALAPQLGVLLADYFGWHSIFLTLTLMGIVLVV-STGLQTNEIAE 186
           + ++FATIMPLV LSPALAP LG  +  +F W +IF TL  + +VL++ +  L+     E
Sbjct: 128 TNRIFATIMPLVGLSPALAPLLGSWILAHFDWQAIFATLFAITLVLMIPAFTLKAAHKKE 187

Query: 187 PKTTSIAQDIKGLLKSKTYLGNVMMFACASAAFFAYLTGMPEIMAQLGYQARDIGLSFIP 246
               +       LL +K Y GNV+++A  SA+FFA+LTG P I+  +GY    IGLS++P
Sbjct: 188 TPADTTPVTFTSLLSTKAYRGNVLIYAACSASFFAWLTGSPFILHDMGYSPAAIGLSYVP 247

Query: 247 QTIAFMVGGYLGKKAVQKYGDELVLKQLIALFTLSAAMIFVASQWTLSSIWPILAPFCLI 306
           QTIAF+VGGY  + A+QK+  + +L  L+ L+ LS    +       + +  IL PFC++
Sbjct: 248 QTIAFLVGGYGCRAALQKWEGQQMLPWLLVLYALSVIATWAVGFIPGAGLAEILIPFCVM 307

Query: 307 AVANGAMYPIVVNRALSSAKQSPATAAGLQNSLQISVSSLSSALVAAMASQAQPVTGIAI 366
           AVANGA+YPIVV +AL    Q+   AA LQN+LQ+ +  L+S +V+A+ +     T   +
Sbjct: 308 AVANGAIYPIVVAQALRPFPQATGRAAALQNTLQLGLCFLASLVVSALIATPLLTTTSVM 367

Query: 367 VLCTGGLWLGYVLSNRTLREQ 387
           ++      LGY + +   REQ
Sbjct: 368 LVTVALALLGYRMQSAAQREQ 388