Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., Bcr/CflA subfamily drug resistance transporter (RefSeq) from Shewanella sp. ANA-3

 Score =  122 bits (307), Expect = 1e-32
 Identities = 94/377 (24%), Positives = 174/377 (46%), Gaps = 12/377 (3%)

Query: 8   LVYLSALSMLGFIATDMYLPAFKMMETAFATGPEQIALSLTVFLVGMALGQLLWGLASDK 67
           L  L +L +L  +A D+YLP+   M   FA    ++  +L +FL  M +GQ+L G  +D+
Sbjct: 6   LPILMSLVLLSPLAIDIYLPSMPTMAAEFAVSASEVQSTLVLFLFAMGVGQILIGPLADR 65

Query: 68  FGHRNTLIAGLLVFTLASAGLAFSSTVWQLLLLRFIQAIGVCAPAVIWQAMVIKRYPSSV 127
           +G R   + G+L++  +S   A +     L L R +Q +  C+ +++  + V   Y    
Sbjct: 66  YGRRPVALFGVLLYGASSLLAAAAIEFHWLQLARVLQGLAACSTSIVVFSAVRDCYSPKE 125

Query: 128 SQQLFATIMPLVALSPALAPQLGVLLADYFGWHSIFLTLTLMGIVLVVSTGLQTNEIAEP 187
             ++++ +   + + PALAP LG LLA  FGW S F+ +TL  I++++  G +  E   P
Sbjct: 126 GARIYSYLNGAICVIPALAPTLGGLLAMQFGWRSTFVFMTLYAILMMLLVGYRLPE-TRP 184

Query: 188 KTTSIAQDIKGLLKSKTYLGNV----MMFAC--ASAAFFAYLTGMPE-IMAQLGYQARDI 240
             T  +  +    + K  L N       FAC  A AA  +Y++  P  ++  LG      
Sbjct: 185 ANTVSSGPLYRWSRYKPVLSNTHFLFYAFACMSAMAAILSYVSYSPVWLIGHLGVSELAF 244

Query: 241 GLSFIPQTIAFMVGGYLGKKAVQKYGDELVLKQLIALFTLSAAMIFVASQW----TLSSI 296
              F    +  +V  +     ++K G+       + L  LSA +I  A  +     +++ 
Sbjct: 245 SGLFGLNALVNIVACFAAPVVIRKLGNRPTAILALVLLVLSAVLIIAAQAFGPSVGMAAA 304

Query: 297 WPILAPFCLIAVANGAMYPIVVNRALSSAKQSPATAAGLQNSLQISVSSLSSALVAAMAS 356
           +  + P  L+ +    +     + ALS+  +   TA  +   +Q+S +S+ + LV   + 
Sbjct: 305 FAFMLPMMLLCIGFAFLLGPATSMALSAFGERAGTATAMLGFIQMSGASVIAGLVQQTSL 364

Query: 357 QAQPVTGIAIVLCTGGL 373
            A     + + + + GL
Sbjct: 365 TAPYAVALVMGVFSVGL 381