Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., Bcr/CflA subfamily drug resistance transporter (RefSeq) from Shewanella sp. ANA-3

 Score =  128 bits (322), Expect = 3e-34
 Identities = 105/388 (27%), Positives = 186/388 (47%), Gaps = 19/388 (4%)

Query: 6   FQLVYLSALSMLGFIATDMYLPAFKMMETAFATGPEQIALSLTVFLVGMALGQLLWGLAS 65
           + L+ L    +L  +  D+YLPA   +  +F+    Q+ L+LT+++  + LGQLL+G  S
Sbjct: 19  YSLLLLIPFDLLASLGMDLYLPAINDIRQSFSVSQGQMQLTLTLYMAILGLGQLLFGPLS 78

Query: 66  DKFGHRNTLIAGLLVFTLASAGLAFSSTVWQLLLLRFIQAIGVCAPAVIWQAMVIKRYPS 125
           D  G R  +IAG LV+  +S  +A + +    LLLR +QA+   A AV+  A    R   
Sbjct: 79  DAIGRRRVVIAGALVYAGSSLAMALTDSFSVFLLLRIVQALS--ASAVLVAAFATVRDVF 136

Query: 126 SVSQQ---LFATIMPLVALSPALAPQLGVLLADYFGWHSIFLTLTLMGIVLVVSTGLQTN 182
           +  ++   ++A +  ++A  P +AP +G L+   + W  IF TL +   ++ +   L+  
Sbjct: 137 ADREEGVVIYAIMGSVLAAVPVVAPFIGSLIDGLWHWRGIFYTLAIFAALVGLHALLKWP 196

Query: 183 EIAEPKTTSIA-QDIKGLLKSKTYLGNVMMFACASAAFFAYLTGMPEI-MAQLGYQARDI 240
           E    +T          ++++K +LG  + +A A  AFF Y +  P I M +LG      
Sbjct: 197 ETRPAQTHPFEWSRCFNIIRAKAFLGYTLAYATAMGAFFVYFSASPSILMDKLGLDKVTF 256

Query: 241 GLSFIPQTIAFMVGGYLGKKAVQKYGDE-LVLKQLIALFTLSAAMIFVASQWTLSSIWPI 299
            L F    I  ++     K  V+++G +  VL+ LI +  LS+ +++        S+   
Sbjct: 257 SLWFGSVAIVMIITTRFVKHLVKRWGTQGTVLRGLIGMM-LSSGLLYGLEWLNGLSLLGF 315

Query: 300 LAPFCLIAVANGAMYPIVVNRALSSAKQSPATAAGLQNSLQISVSSLSSALVAAMASQAQ 359
           + P   I V       +  N AL++   S    AGL  +L  ++ SL  + + ++     
Sbjct: 316 MLPMYFIGVHIALTCAVTANGALAAFSHS----AGLATALYYAIESLFLSALVSLLIWLL 371

Query: 360 PVTGIAIVLC-----TGGLWLGYVLSNR 382
           P +G  +V+C     +  L L ++LS R
Sbjct: 372 P-SGTTLVICSYILISASLSLLFILSIR 398