Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 392 a.a., major facilitator transporter (RefSeq) from Shewanella sp. ANA-3

 Score =  117 bits (293), Expect = 6e-31
 Identities = 100/378 (26%), Positives = 171/378 (45%), Gaps = 13/378 (3%)

Query: 14  LSMLGFIATDMYLPAFKMMETAFATGPEQIALSLTVFLVGMALGQLLWGLASDKFGHRNT 73
           L M   I   +Y PA   +   FA      + +L+V+ +  A+G   WG  +D  G RN 
Sbjct: 13  LMMFPQIMETIYSPALPNIAENFAVSVTSASQTLSVYFIAFAVGVFCWGRLADIIGRRNA 72

Query: 74  LIAGLLVFTLASAGLAFSSTVWQLLLLRFIQAIGVCAPAVIWQAMVIKRYPSSVSQQLFA 133
           ++AGLL + + SA     S    LL  R + A G    +VI Q M+   Y      ++F+
Sbjct: 73  MLAGLLCYAIGSACALMISDFTLLLFARVLSAFGAAVGSVITQTMMRDSYNGEELAKVFS 132

Query: 134 TIMPLVALSPALAPQLGVLLADYFGWHSIFLTLTLMGIVLVVSTGLQTNEIAEPKTTSIA 193
            +   + +SP +   LG +L+ Y+G+  +F+ L +  IVL+  +     E  +P+ T   
Sbjct: 133 VMGMSLGISPIIGLLLGSILSAYWGYQGVFVALMVSAIVLLFLSVKSLPE-TKPEHTQKI 191

Query: 194 QDIKGLLKSKTYLG---NVMMFACASAAFFAYLTGMPEIMAQLGYQARDIGLSFIPQTIA 250
             ++  +K  T +G   N ++ A  +  +F+Y +  P +    G      G S +     
Sbjct: 192 AIVELAIKMLTDIGIIKNTLLVASFNLMWFSYFSLAPFMFEARGLSTLAFGASGLLLGFG 251

Query: 251 FMVGGYLGKKAVQK-YGDELV--LKQLIALFTLSAAMIFVASQWTLSSIWPILAPFCLIA 307
             +G Y  K  + + Y   L+  L  L+ALF      +F ++   L++++  L P  LI 
Sbjct: 252 AFLGSYFNKLLLGRGYSCALLVRLASLMALFGGLGIWLFQSTNIGLNNVY-FLLPMLLIV 310

Query: 308 VANGAMYPIVVNRALSSAKQSPATAAGLQNSLQISVSSLSSALVAAMASQAQPVTGIAIV 367
           +A G   P +++ AL++ +    +A  L       +  L     A M S    V  +A +
Sbjct: 311 IAYGIAIPNILSSALANYRAYAGSAGALFGLFYYILLGLGLG-GAGMVSHLGGVITLAAL 369

Query: 368 LCTGGLWLGYV-LSNRTL 384
           LC G   LGY  L+ RT+
Sbjct: 370 LCVG---LGYAGLAGRTV 384