Pairwise Alignments

Query, 302 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  166 bits (421), Expect = 5e-46
 Identities = 93/286 (32%), Positives = 152/286 (53%), Gaps = 2/286 (0%)

Query: 8   LEMLDAVARLGSFTAAAEVLHKVPSAISYSVRQIESELGVVLFRRLPRKVELTPAGELFM 67
           L  LDA+ + GSF AAAE LHKVPSA++Y+++++E E G  LF R  ++  LT AG L +
Sbjct: 10  LRALDAIDKKGSFAAAAESLHKVPSALTYTIQKLEQEFGTPLFDRSKQRARLTAAGRLVL 69

Query: 68  LEARQLLRQMEEIRAQTKRAAHGWRKTLKVTLDNVVKLDKMKPMVEAFYQTFDFAELQIN 127
            + R++L+  + +         GW + L++  D  +    +   + AF       ++ + 
Sbjct: 70  EQGREILQSTQRLADAVAALESGWERELRIARDTAMPPGPLLEALTAFLALSVPVDISLA 129

Query: 128 MEVFNGSWEAIAQGRADIVIGATAAVPVGGDFEVRDMGILDWAFVMSPNHPCVREQN-LS 186
            E   G W+A+   RAD+VIGA   +P  G FE   +G L++ F ++P HP    +  L 
Sbjct: 130 EESLGGGWDALHSRRADLVIGANGDLP-RGLFETHCIGQLEFVFALAPFHPLAEAEGVLQ 188

Query: 187 EGFISQFLAICLDDTSSVLPKRHTEHYPKQRRLLLPNWYSAIESLKSGLGVGYMPRHMAQ 246
              +  F ++ + D+S +LP R +  +  ++ L + +  + IE    GLG G++PRH+A 
Sbjct: 189 LEQLMPFPSVVVSDSSQLLPARSSGLFSSRQTLRVASMEAKIELQCRGLGTGFIPRHLAA 248

Query: 247 PLLASGQLVEKVLPDEKLLSHCCLVWRKDDNHKLIEWMVNYLGSSD 292
           PL+AS  LVEK     +      L W K+   K + W V +L  +D
Sbjct: 249 PLIASDALVEKACALPRPSQPVFLAWHKEHQGKALAWFVAHLCKAD 294