Pairwise Alignments

Query, 302 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  102 bits (254), Expect = 1e-26
 Identities = 74/254 (29%), Positives = 126/254 (49%), Gaps = 13/254 (5%)

Query: 8   LEMLDAVARLGSFTAAAEVLHKVPSAISYSVRQIESELGVVLFRRLPRKVELTPAGELFM 67
           L M + VA  GS  AA++ LHK   AIS S++Q+ES+L VVLF R   ++ LT  G   +
Sbjct: 6   LLMFNTVALAGSLKAASDKLHKTQPAISQSIKQLESQLDVVLFDRQGYRLALTQEGRKLL 65

Query: 68  LEARQLLRQMEEIRAQTKRAAHGWRKTLKVTLDNVVKLDKMKPMVEAFYQTFDFAELQIN 127
             A+++L + +E+R   K  A G   ++ +  +    L ++ PM+E     F   ++ + 
Sbjct: 66  QYAQRVLNEAQEMRQVAKHLAIGNEASITLAFEASFNLARILPMLERTQLEFPHTQIILK 125

Query: 128 MEVFNGSWEAIAQGRADIVIGATAAVPVGGDFEVR----DMGILDWAFVMSPNHPCVREQ 183
            E   G+ EA+ QG+ADI I A      GG   +R    ++G L    ++    P +  +
Sbjct: 126 QEYLTGALEALNQGKADIAISA------GGIESMRSNHFELGFLFSGSLLDVASPRLLSR 179

Query: 184 NLSEGFISQFL---AICLDDTSSVLPKRHTEHYPKQRRLLLPNWYSAIESLKSGLGVGYM 240
             S   + + +    I + DT +            QRR  + ++Y+    ++SG+G G +
Sbjct: 180 YPSLSHVKELVNEYQIVIQDTGTGTANIEFGVQAGQRRWYVNDFYTKKMLIQSGMGWGKL 239

Query: 241 PRHMAQPLLASGQL 254
           P +M +  LA+G L
Sbjct: 240 PYYMVEEALANGSL 253