Pairwise Alignments

Query, 302 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  103 bits (257), Expect = 5e-27
 Identities = 77/266 (28%), Positives = 131/266 (49%), Gaps = 15/266 (5%)

Query: 8   LEMLDAVARLGSFTAAAEVLHKVPSAISYSVRQIESELGVVLFRRLPRKVELTPAGELFM 67
           L M + VA  GS  AA++ LHK   AIS S++Q+ES+L +VLF R   ++ LT  G   +
Sbjct: 6   LLMFNTVALAGSLKAASDKLHKTQPAISQSIKQLESQLDLVLFDRQGYRLTLTQEGRKLL 65

Query: 68  LEARQLLRQMEEIRAQTKRAAHGWRKTLKVTLDNVVKLDKMKPMVEAFYQTFDFAELQIN 127
             A+++L + +E+R   K  A G   ++ +  +    L ++ P++E     F   ++ + 
Sbjct: 66  QYAQRVLNEAQEMRQVAKHLAKGNEASITLAFEASFNLTRILPILERTQNEFPHTQIILK 125

Query: 128 MEVFNGSWEAIAQGRADIVIGATAAVPV-GGDFEVRDMGILDWAFVMSP----NHPC--- 179
            E   G+ EA+ QG+ADI I A    P+    FE+  +       V SP     HP    
Sbjct: 126 QEYLTGALEALNQGKADIAISAGGIEPIRSSHFELAYLFSGSLLDVASPRLLSRHPTLGH 185

Query: 180 VREQNLSEGFISQFLAICLDDTSSVLPKRHTEHYPKQRRLLLPNWYSAIESLKSGLGVGY 239
           VRE       ++++  I + DT +            QRR  + ++Y+    ++SG+G G 
Sbjct: 186 VRE------LVNEY-QIVIQDTGTGTANIEFGVQAGQRRWYVNDFYTKRMLIQSGMGWGK 238

Query: 240 MPRHMAQPLLASGQLVEKVLPDEKLL 265
           +P ++ +  LA G L+   L + + L
Sbjct: 239 LPHYLVEQALADGSLLPLELRERQNL 264