Pairwise Alignments

Query, 723 a.a., fatty acid oxidation complex subunit alpha FadB from Vibrio cholerae E7946 ATCC 55056

Subject, 701 a.a., 3-hydroxyacyl-CoA dehydrogenase from Pseudomonas stutzeri RCH2

 Score =  318 bits (816), Expect = 4e-91
 Identities = 215/693 (31%), Positives = 346/693 (49%), Gaps = 27/693 (3%)

Query: 28  VNKLDLHTLESLDKALDALAADSSVKGLLLSSDKEAFIVGADITEFLGLFAKPEA-ELDE 86
           VN L     E L KA  +  AD  V+ + L  +   FI GADI EF      P   E+ E
Sbjct: 23  VNALGQAVREGLQKAFQSAEADPQVRAVALVCEGNTFIAGADIKEFGKPPQAPSLPEVIE 82

Query: 87  WLQFANRIFNKLEDLPFPTLSALKGHTLGGGCECVLATDFRIGDATTSIGLPETKLGIMP 146
            ++  N+           +++ + G  LGGG E  L   +RI      +GLPE KLG++P
Sbjct: 83  IIEACNK----------SSVAVIHGTALGGGLEVALGCHYRIARKDAKVGLPEVKLGLLP 132

Query: 147 GFGGTVRLPRLIGADSAMEIITQGKACRAEEALKVGLLDAIVDSDKLIDSAITTLTQAIE 206
           G GGT RLPRL G + A+E+I  G+   A EA++  ++D + + D L+++ +  + + +E
Sbjct: 133 GAGGTQRLPRLAGVEKALEMIVSGQPISAAEAVEHNIVDELFEGD-LVEAGLAYVRRMVE 191

Query: 207 EKLDWQKRRQQKTSALTLSKLEAMMSFTMAKGMVAQVAGKHYP---APMTSVVTIEEAAR 263
           E     +R  ++T  L  +  EA++     +   A+VA K  P   +P+  +  +E A +
Sbjct: 192 EGRT-PRRTGEQTQGLEGADNEALI-----RAKHAEVA-KRMPGLFSPLRCIAAVEAATK 244

Query: 264 LPRDAALDIERKHFIKLAKSTEAQALVGIFLNDQYIKGLAKQSAKAASQDTQHAAVLGAG 323
           LP    L  ER+ F +   S +  ALV  F  ++    +    +    +    AAV+G G
Sbjct: 245 LPLAEGLKRERELFAECLNSPQRGALVHSFFAERQAGKINDLPSDTKPRSINSAAVIGGG 304

Query: 324 IMGGGIAYQSALKGVPVLMKDIAPHSLELGMTEAAKLLNKQLERGKIDGFKMAGILASIT 383
            MG GIA   A  GVPV + +I   +L+ G+  A       ++RG +    M   LA I 
Sbjct: 305 TMGVGIALSFANAGVPVKLLEINEEALQRGLQRARDTYAASVKRGSLTEDAMEQRLALIE 364

Query: 384 PSLHYAGIDQADVIVEAVVENPKVKAAVLSEVEGLVDTETILTSNTSTIPINLLAKSLKR 443
               YA +  ADV+VEAV E   VK  V  +++ +     IL SNTS++ ++ +A   KR
Sbjct: 365 GVTEYAALADADVVVEAVFEEMGVKQQVFEQLDAICKPGAILASNTSSLDLDAIAAFTKR 424

Query: 444 PQNFCGMHFFNPVHRMPLVEIIRGEHTSEDTINRVVAYAAKMGKSPIVVNDCPGFFVNRV 503
           P++  G+HFF+P + M L+E++RG  TS++ +   +A   ++ K  +VV  C GF  NR+
Sbjct: 425 PEDVVGLHFFSPANVMRLLEVVRGAKTSDEVLATAMAIGKQLKKVSVVVGVCDGFVGNRM 484

Query: 504 LFPYFAGFSLLMRDGANFTEIDKVMERQFGWPMGPAYLLDVVGIDTAHHAQAVMAEGFPT 563
           +F Y      L+ +GA   ++D  + R FG  MGP  + D+ G+D     +       P 
Sbjct: 485 VFQYGREAEFLLEEGATPQQVDAAL-RNFGMAMGPFAMRDLSGLDIGQAIRKRQRATLPA 543

Query: 564 RMAKSGREAIDALYEAKKFGQKNGSGFYQYTVDKKGKPKKAFSDDVLAILAPVCGAP-QS 622
            +        D L  A   GQK G+G+Y+Y    +   +      +L   +   G   ++
Sbjct: 544 HL--DFPTVSDKLCAAGMLGQKTGAGYYRYEPGNRTPQENPDLAPMLEAASLEKGIERKA 601

Query: 623 FDPQTLIERTMIPMINEVVLCLEEGIIASAQEADMALVYGLGFPPFRGGVFRYLDTIGIA 682
            D Q ++ER +  ++NE    LEEGI   + + D+  + G GFP FRGG   Y D++G+ 
Sbjct: 602 LDEQYIVERCIFALVNEGAKILEEGIAQRSSDIDVIYLNGYGFPAFRGGPMFYADSVGLD 661

Query: 683 NYVA-MAEKYADLGALYQVPQLLKNMAQQGTSF 714
             +A + E +A  G  ++   LL+ +A +G +F
Sbjct: 662 RVLARVKELHARCGDWWKPAPLLEKLAAEGRTF 694