Pairwise Alignments

Query, 723 a.a., fatty acid oxidation complex subunit alpha FadB from Vibrio cholerae E7946 ATCC 55056

Subject, 715 a.a., fatty oxidation complex, alpha subunit FadB from Pseudomonas stutzeri RCH2

 Score =  775 bits (2002), Expect = 0.0
 Identities = 396/716 (55%), Positives = 509/716 (71%), Gaps = 3/716 (0%)

Query: 1   MIYQAKTLQVKQLANGIAELSFCAPA-SVNKLDLHTLESLDKALDALAADSSVKGLLLSS 59
           MIY+ K + VK L +GI EL+F     SVNK +  TL  L +A+DA+ AD+SVKG++++S
Sbjct: 1   MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLNDLRQAVDAIKADASVKGVIVTS 60

Query: 60  DKEAFIVGADITEFLGLFAKPEAELDEWLQFANRIFNKLEDLPFPTLSALKGHTLGGGCE 119
            K+ FIVGADITEF+  F   + EL      AN+IF+  EDL  PT++A+ G  LGGG E
Sbjct: 61  GKDVFIVGADITEFVDNFKMADEELVAGNLEANKIFSDFEDLGVPTVAAINGIALGGGFE 120

Query: 120 CVLATDFRIGDATTSIGLPETKLGIMPGFGGTVRLPRLIGADSAMEIITQGKACRAEEAL 179
             +A D+R+   T  +GLPE KLGI PGFGGTVRLPRLIG D+A+E I  GK  RAE+AL
Sbjct: 121 MCMAADYRVMSTTAKVGLPEVKLGIYPGFGGTVRLPRLIGVDNAVEWIASGKENRAEDAL 180

Query: 180 KVGLLDAIVDSDKLIDSAITTLTQAIEEKLDWQKRRQQKTSALTLSKLEAMMSFTMAKGM 239
           KV  +DA+V  DKL  +A+  + +AI  +LD++ +RQ K   L L+ +E MM+F  +K  
Sbjct: 181 KVHAVDAVVAPDKLQAAALDLVKRAISGELDYKAKRQPKLDKLKLNAIEQMMAFETSKAF 240

Query: 240 VAQVAGKHYPAPMTSVVTIEEAARLPRDAALDIERKHFIKLAKSTEAQALVGIFLNDQYI 299
           VA  AG +YPAP+ ++ TI++AA   RD A+++E   F+KLAK++ AQ+LVG+FL+DQ +
Sbjct: 241 VAGQAGPNYPAPVEAIKTIQKAANFTRDKAIEVEAAGFVKLAKTSVAQSLVGLFLSDQEL 300

Query: 300 KGLAKQSAKAASQDTQHAAVLGAGIMGGGIAYQSALKGVPVLMKDIAPHSLELGMTEAAK 359
           K  AK   K A +D + AAVLGAGIMGGGIAYQSA+KG P+LMKDI    +++G+ EA+K
Sbjct: 301 KKKAKAYDKQA-RDVKLAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEGIQMGLDEASK 359

Query: 360 LLNKQLERGKIDGFKMAGILASITPSLHYAGIDQADVIVEAVVENPKVKAAVLSEVEGLV 419
           LL K++E+G++   KMA  L +I P++ Y      D++VEAVVENPKVK AVL+EVEG V
Sbjct: 360 LLGKRVEKGRLTADKMAQALNAIRPTMSYGDFGNVDIVVEAVVENPKVKHAVLAEVEGHV 419

Query: 420 DTETILTSNTSTIPINLLAKSLKRPQNFCGMHFFNPVHRMPLVEIIRGEHTSEDTINRVV 479
             + I+ SNTSTI IN LA++LKRP+NFCGMHFFNPVH MPLVE+IRGE TSE  I   V
Sbjct: 420 REDAIIASNTSTISINYLAQALKRPENFCGMHFFNPVHMMPLVEVIRGEKTSEVAIATTV 479

Query: 480 AYAAKMGKSPIVVNDCPGFFVNRVLFPYFAGFSLLMRDGANFTEIDKVMERQFGWPMGPA 539
           AYA KMGKSP+VVNDCPGF VNRVLFPYF GF+  +  G +F   DKVME+ FGWPMGPA
Sbjct: 480 AYAKKMGKSPVVVNDCPGFLVNRVLFPYFGGFARAIAHGVDFVRADKVMEK-FGWPMGPA 538

Query: 540 YLLDVVGIDTAHHAQAVMAEGFPTRMAKSGREAIDALYEAKKFGQKNGSGFYQYTVDKKG 599
           YL+DVVG+DT HH + VMAEGFP RM    R A+D +YEA + GQKNG GFY Y +DKKG
Sbjct: 539 YLMDVVGMDTGHHGRDVMAEGFPDRMKDDTRTAVDVMYEANRLGQKNGKGFYAYEMDKKG 598

Query: 600 KPKKAFSDDVLAILAPVCGAPQSFDPQTLIERTMIPMINEVVLCLEEGIIASAQEADMAL 659
           KPKK        +L P+    +    + +I   MIP+  E V CLE+GI+ +A EADM L
Sbjct: 599 KPKKVVDAQAYELLKPIVAETRELSDEDIINYMMIPLCLETVRCLEDGIVETAAEADMGL 658

Query: 660 VYGLGFPPFRGGVFRYLDTIGIANYVAMAEKYADLGALYQVPQLLKNMAQQGTSFY 715
           +YG+GFPPFRGG  RY+D+IG+A +VAMA+KYADLG LY     L+ MA  G  FY
Sbjct: 659 IYGIGFPPFRGGALRYIDSIGVAEFVAMADKYADLGPLYHPTAKLREMAANGQRFY 714