Pairwise Alignments

Query, 723 a.a., fatty acid oxidation complex subunit alpha FadB from Vibrio cholerae E7946 ATCC 55056

Subject, 716 a.a., multifunctional fatty acid oxidation complex subunit alpha (RefSeq) from Shewanella loihica PV-4

 Score =  927 bits (2396), Expect = 0.0
 Identities = 473/717 (65%), Positives = 562/717 (78%), Gaps = 1/717 (0%)

Query: 1   MIYQAKTLQVKQLANGIAELSFCAPASVNKLDLHTLESLDKALDALAADSSVKGLLLSSD 60
           MIYQ+ T+QV+ L + IA L F A  SVNK D  TL SL+ ALDALA    VKGL+L+S 
Sbjct: 1   MIYQSPTIQVELLEDNIARLCFNAEGSVNKFDRETLNSLNDALDALAQTQGVKGLMLTSG 60

Query: 61  KEAFIVGADITEFLGLFAKPEAELDEWLQFANRIFNKLEDLPFPTLSALKGHTLGGGCEC 120
           K+AFIVGADITEFLGLFA+ +  L  WL+ AN++FNKLEDLPFPT+SA+KG  LGGGCE 
Sbjct: 61  KDAFIVGADITEFLGLFAQDDNVLQGWLEDANKVFNKLEDLPFPTISAIKGFALGGGCET 120

Query: 121 VLATDFRIGDATTSIGLPETKLGIMPGFGGTVRLPRLIGADSAMEIITQGKACRAEEALK 180
           +LATD RI D +  IGLPETKLGI+PGFGGTVRLPR+IGAD+A+E IT GK  R E ALK
Sbjct: 121 ILATDLRIADTSARIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGKDQRPEAALK 180

Query: 181 VGLLDAIVDSDKLIDSAITTLTQAIEEKLDWQKRRQQKTSALTLSKLEAMMSFTMAKGMV 240
           VG +DA+V  + L  +A   L  AI EK+DWQ RRQ+K S LTL KLEAMMSF  AKGMV
Sbjct: 181 VGAIDAVVAPELLETAACQMLQDAISEKIDWQARRQRKLSPLTLPKLEAMMSFATAKGMV 240

Query: 241 AQVAGKHYPAPMTSVVTIEEAARLPRDAALDIERKHFIKLAKSTEAQALVGIFLNDQYIK 300
            +VAGKHYPAPM  V  IE+AA   R  AL +E + FIKLAK+  A+AL+GIFLNDQ +K
Sbjct: 241 FKVAGKHYPAPMAVVEVIEKAALSERAEALQVEHQAFIKLAKTDVAKALIGIFLNDQLVK 300

Query: 301 GLAKQSAKAASQDTQHAAVLGAGIMGGGIAYQSALKGVPVLMKDIAPHSLELGMTEAAKL 360
           G AK++AK A Q    AAVLGAGIMGGGIAYQSA KG P++MKDI   +L+LG+ EAAKL
Sbjct: 301 GKAKKAAKQA-QAVNSAAVLGAGIMGGGIAYQSASKGTPIVMKDINQAALDLGLNEAAKL 359

Query: 361 LNKQLERGKIDGFKMAGILASITPSLHYAGIDQADVIVEAVVENPKVKAAVLSEVEGLVD 420
           L  Q+ RG+    KMAG+L +IT +L Y  + QADV+VEAVVE+PKVKA VL+EVE +V 
Sbjct: 360 LTAQINRGRSTPAKMAGVLNNITATLDYNALKQADVVVEAVVEHPKVKATVLAEVEQVVG 419

Query: 421 TETILTSNTSTIPINLLAKSLKRPQNFCGMHFFNPVHRMPLVEIIRGEHTSEDTINRVVA 480
            + I+TSNTSTI INLLAKSL++P+ FCGMHFFNPVH+MPLVE+IRGEH+SE+T+  VVA
Sbjct: 420 EDAIITSNTSTISINLLAKSLQKPERFCGMHFFNPVHKMPLVEVIRGEHSSEETVASVVA 479

Query: 481 YAAKMGKSPIVVNDCPGFFVNRVLFPYFAGFSLLMRDGANFTEIDKVMERQFGWPMGPAY 540
           YAAKMGK+PIVVNDCPGFFVNRVLFPYFAGFS L+ DGA+F  IDKVME+QFGWPMGPAY
Sbjct: 480 YAAKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLEDGADFAAIDKVMEKQFGWPMGPAY 539

Query: 541 LLDVVGIDTAHHAQAVMAEGFPTRMAKSGREAIDALYEAKKFGQKNGSGFYQYTVDKKGK 600
           LLDVVG+DT HHAQAVMAEGFP RMAK G++AID ++EA +FGQKNG GFYQY+VD++GK
Sbjct: 540 LLDVVGLDTGHHAQAVMAEGFPDRMAKEGKDAIDVMFEADRFGQKNGKGFYQYSVDRRGK 599

Query: 601 PKKAFSDDVLAILAPVCGAPQSFDPQTLIERTMIPMINEVVLCLEEGIIASAQEADMALV 660
           PKK        +L    G  + F    +I RTMIPMI E V CLEEGIIA+  EADM LV
Sbjct: 600 PKKEVDPLSYELLGNAFGEQKEFSSDEIIARTMIPMIIETVRCLEEGIIATPAEADMGLV 659

Query: 661 YGLGFPPFRGGVFRYLDTIGIANYVAMAEKYADLGALYQVPQLLKNMAQQGTSFYSA 717
           YGLGFPPFRGGVFRYLDT+G+AN+VA+A++YA LG LYQV   ++ +A    S+Y A
Sbjct: 660 YGLGFPPFRGGVFRYLDTLGVANFVALADQYAHLGGLYQVTDKMRELAATNGSYYPA 716