Pairwise Alignments

Query, 723 a.a., fatty acid oxidation complex subunit alpha FadB from Vibrio cholerae E7946 ATCC 55056

Subject, 709 a.a., multifunctional fatty acid oxidation complex subunit alpha (RefSeq) from Shewanella sp. ANA-3

 Score =  403 bits (1035), Expect = e-116
 Identities = 253/723 (34%), Positives = 396/723 (54%), Gaps = 29/723 (4%)

Query: 6   KTLQVKQLANGIAELSFCAPA-SVNKLDLHTLESLDKALDALAADSSVKGL-LLSSDKEA 63
           KT  + +  +GIA L    P  ++N L       + + L  +  DSS++GL L+S  K++
Sbjct: 3   KTFNLTRREDGIAILMMDVPGETMNTLKAEFGPEISEILSEIKRDSSIRGLVLISGKKDS 62

Query: 64  FIVGADITEFLGLFAKPEAELDEWLQFANRIFNKLEDLPFPTLSALKGHTLGGGCECVLA 123
           F+ GADI+         +A+     Q  + +FN+LE L  P ++A+ G  LGGG E  LA
Sbjct: 63  FVAGADISMLDACQTAGDAKALS--QQGHVVFNELEALNIPVVAAIHGACLGGGLELALA 120

Query: 124 TDFRI--GDATTSIGLPETKLGIMPGFGGTVRLPRLIGADSAMEIITQGKACRAEEALKV 181
              R+   D  T +G+PE +LG++PG GGT RLPRL+G  +A++++  GK  R ++ALK+
Sbjct: 121 CHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKM 180

Query: 182 GLLDAIVDSDKLIDSAITTLTQAIEEKLDWQKRRQQKTSALTLSKLEAM-----MSFTMA 236
           GL++ +V    L+ +A+       E  L  ++  +    +L    LE       + F  A
Sbjct: 181 GLVNDVVPQTILLQTAV-------EMALAGKRTAKPVKKSLVNQLLEGTGFGRNIIFDQA 233

Query: 237 KGMVAQVAGKHYPAPMTSVVTIEEAARLPRDAALDIERKHFIKLAKSTEAQALVGIFLND 296
              V +    +YPAP   +  + +         L++E  HF +L  S E++AL  IF   
Sbjct: 234 AKQVVKKTQGNYPAPAKIIDCVRQGMAKGMQKGLEVEASHFAELVVSKESEALRSIFFAT 293

Query: 297 QYIKGLAKQSAKAAS-QDTQHAAVLGAGIMGGGIAYQSALKG-VPVLMKDIAPHSLELGM 354
             +K   +  A+ A+ +  + A +LG G+MGGGIA  +  K  +P  +KDI    L   +
Sbjct: 294 TEMK--KETGAEGATPRKVKKAVILGGGLMGGGIASVTTTKAKIPARVKDINEKGLSNAL 351

Query: 355 TEAAKLLNKQLERGKIDGFKMAGILASITPSLHYAGIDQADVIVEAVVENPKVKAAVLSE 414
           + A KLL+K ++R  +       ++A +T +  Y G+  AD++VEAV E+  +K  ++ +
Sbjct: 352 SYAYKLLDKGVKRRHMTPAVRDNLMALMTTTTEYKGVKDADIVVEAVFEDLALKHQMVKD 411

Query: 415 VEGLVDTETILTSNTSTIPINLLAKSLKRPQNFCGMHFFNPVHRMPLVEIIRGEHTSEDT 474
           +E      TI  SNTS++PI  +A++  RP+N  G+H+F+PV +MPLVE+I    TS +T
Sbjct: 412 IERECGEHTIFASNTSSLPIGQIAQAASRPENVIGLHYFSPVEKMPLVEVIAHAKTSPET 471

Query: 475 INRVVAYAAKMGKSPIVVNDCPGFFVNRVLFPYFAGFSLLMRDGANFTEIDKVMERQFGW 534
           I   VA+A K GK+PIVV D  GF+VNR+L  Y    + L+ +G +   +DK + + FG+
Sbjct: 472 IATTVAFARKQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSIEHLDKALVK-FGF 530

Query: 535 PMGPAYLLDVVGIDTAHHAQAVMAEGFPTRMAKSGREAIDALYEAKKFGQKNGSGFYQYT 594
           P+GP  LLD VGID       ++ +    R       A D L    + G+KNG GFYQY 
Sbjct: 531 PVGPITLLDEVGIDVGAKIAPILEKELGERF--KAPAAFDKLLSDDRKGRKNGKGFYQYA 588

Query: 595 V-DKKGKPKKAFSDDVLAILAPVCGAPQSFDPQTLIERTMIPMINEVVLCLEEGIIASAQ 653
             +K    KKA  + V A+L    G  +  D   + ER ++ M+NE V CL++GIIAS +
Sbjct: 589 AGNKASSKKKAVDESVYAVLGIKPGMDK--DLSAVAERCVVQMLNEAVRCLDDGIIASPR 646

Query: 654 EADMALVYGLGFPPFRGGVFRYLDTIGIANYVAMAEKY-ADLGALYQVPQLLKNMAQQGT 712
           + D+  ++G+GFPPF GG F Y+DT+G  N V + E+Y A  G  ++    LK MA +  
Sbjct: 647 DGDIGAIFGIGFPPFLGGPFHYIDTLGADNLVNILERYQAQYGDRFEPCPRLKAMAAEKA 706

Query: 713 SFY 715
            F+
Sbjct: 707 RFF 709