Pairwise Alignments

Query, 485 a.a., potassium uptake protein TrkH from Vibrio cholerae E7946 ATCC 55056

Subject, 486 a.a., potassium uptake protein TrkH (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  691 bits (1784), Expect = 0.0
 Identities = 334/485 (68%), Positives = 406/485 (83%), Gaps = 1/485 (0%)

Query: 1   MQFRSIIRIVGLLLALFSVSMLAPALVALIYRDGAGVPFVSTFFVLLLCGGLFWFPNRHH 60
           MQ+++IIRI+GLL+ LFS++ML PAL+A+ Y DG G  F+  FFV L  G   W+P+R  
Sbjct: 1   MQYKTIIRIIGLLIGLFSITMLPPALIAIWYNDGGGTAFIQAFFVSLFIGFWLWYPHRRC 60

Query: 61  KHELKARDGFLIVVLFWTVIGSAGALPFLLAADPNISVTDAFFESFSALTTTGATVIVGL 120
           K EL+ R+GFLIVVLFWTV+GS GALPF+ ++ P++S TD+FFESFSALTTTGATVIVGL
Sbjct: 61  KEELRTREGFLIVVLFWTVLGSIGALPFIFSSQPDLSWTDSFFESFSALTTTGATVIVGL 120

Query: 121 DELPKAILFYRQFLQWFGGMGIIVLAVAILPVLGIGGMQLYRAEIPGPVKDTKVTPRIAE 180
           D LPKAILFYR  LQW GGMGIIVLAVAILPVLGIGGMQLYRAEIPGPVKD+K+TPRIAE
Sbjct: 121 DSLPKAILFYRHLLQWLGGMGIIVLAVAILPVLGIGGMQLYRAEIPGPVKDSKMTPRIAE 180

Query: 181 TAKALWYIYLSLTIACASAFWLAGMSLFDAICHSFSTIAIGGFSTHDASMGYFDSYAINL 240
           TAKALWYIYL LTI+CA A+WLAGMS+FDAICHSFSTIAIGGFSTHDASMGYF+S  INL
Sbjct: 181 TAKALWYIYLLLTISCAGAYWLAGMSMFDAICHSFSTIAIGGFSTHDASMGYFNSPVINL 240

Query: 241 ITVVFLLISSCNFTLHYAAFATGGVHPKYYWRDPEFRAFFVIQVLLFVICFSVLLKHHS- 299
           I V FL++S+ NF++H+AAF+  G++ K Y+RD EF+    IQ+LL  ICF  L  +   
Sbjct: 241 ICVFFLIVSAVNFSVHFAAFSWRGINLKVYFRDTEFKVLVAIQLLLTAICFFTLYFYSDI 300

Query: 300 YDSFYQAFDQALFQTVSISTTAGFTTTGFSDWPLFLPVLLLFSSFIGGCAGSTGGGMKVI 359
           YD+  +  + ALFQ VSI+TT GF T  F+ WPLFLP+LL+FSSFIGGC GST GG+KVI
Sbjct: 301 YDTPEETLNHALFQAVSIATTTGFGTDSFNMWPLFLPMLLMFSSFIGGCGGSTAGGIKVI 360

Query: 360 RVLLLTLQGAREMKRLVHPRAIYPIKLGGRALSQRVVDAVWGFFSAYALVFVVCMLALIA 419
           RV+LL LQG+RE+KRLVHP+A++ I++G +AL  R+VDAVWGFFSAYALVFV+CMLAL+A
Sbjct: 361 RVILLLLQGSRELKRLVHPKAMFSIRIGSKALPDRIVDAVWGFFSAYALVFVLCMLALMA 420

Query: 420 TGMDELSAFSAVAATLNNLGPGLGEVAVHFADVNDKAKWILIASMLFGRLEIFTLLILLT 479
            G+D++++FSA AA LNNLGPGLGEVA ++A + D AKW+L+ +MLFGRLEIFTLLIL T
Sbjct: 421 MGLDDITSFSATAACLNNLGPGLGEVASNYASIGDGAKWVLVVAMLFGRLEIFTLLILFT 480

Query: 480 PTFWR 484
           PTFW+
Sbjct: 481 PTFWK 485