Pairwise Alignments

Query, 174 a.a., menaquinone-dependent protoporphyrinogen IX dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 183 a.a., protoporphyrinogen oxidase (RefSeq) from Shewanella amazonensis SB2B

 Score =  117 bits (292), Expect = 1e-31
 Identities = 59/171 (34%), Positives = 100/171 (58%), Gaps = 8/171 (4%)

Query: 4   LLLYSSQEGQTRKIIERIAQQMPE--YDCDIQDLHQVHEIALADYEK---ILIGASIRYG 58
           LL+Y S+ G TRKI E IA ++    + C +  +    +    D+E    + +GA + YG
Sbjct: 10  LLIYFSRGGHTRKISEAIAARLKACGHGCTLMSVSDALQNP-PDWEAFDVVALGACVLYG 68

Query: 59  RLNEKLYQFIQRHVTTLTNSKAAFFCVNLTARKEDQGKDTPEGSVYIQTFLKKSPWQPER 118
             ++ +++ + R+   L++  ++F+CVN+ AR  +  K  PE + Y+Q FL  SPWQP  
Sbjct: 69  SYDKSVFELVDRYGGVLSSKVSSFYCVNVVARNPE--KRIPENNKYLQKFLALSPWQPGD 126

Query: 119 IAVFAGALYYPRYRWFDKMMIRLIMTLTGGETDTSKEVEYTNWEKVSQFGE 169
           + + AG + YP + W+D +MIRLIM +T G TD    ++YT+W+ V  + +
Sbjct: 127 LKIIAGKVDYPAWPWYDALMIRLIMKMTNGPTDPKAVIDYTDWQDVDAYAD 177