Pairwise Alignments

Query, 174 a.a., menaquinone-dependent protoporphyrinogen IX dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 177 a.a., protoporphyrinogen oxidase (RefSeq) from Shewanella amazonensis SB2B

 Score =  132 bits (332), Expect = 3e-36
 Identities = 74/173 (42%), Positives = 103/173 (59%), Gaps = 11/173 (6%)

Query: 4   LLLYSSQEGQTRKIIERIAQQMPEYD-----CDIQDLHQVHEIALADYEKILIGASIRYG 58
           L+LYS+ +GQTRKI ERI  +           DI +   + E A    +K+L+GASIRYG
Sbjct: 5   LILYSTVDGQTRKICERIKARCEAAGEQVTMADIAEADALLETA----DKVLVGASIRYG 60

Query: 59  RLNEKLYQFIQRHVTTLTNSKAAFFCVNLTARKEDQGKDTPEGSVYIQTFLKKSPWQPER 118
           +    L++F  R+   L      FF VN+ ARK +  K+TP  + Y+Q FL+ S WQP++
Sbjct: 61  KHRPALFEFATRYGAVLGTKINGFFTVNVVARKPE--KNTPATNPYMQKFLQLSQWQPQQ 118

Query: 119 IAVFAGALYYPRYRWFDKMMIRLIMTLTGGETDTSKEVEYTNWEKVSQFGEQF 171
           + VFAG + YPRY  FD+ MIR IM +T G TD     E+T+W+KV  F + F
Sbjct: 119 LGVFAGKIDYPRYGLFDRTMIRFIMWITKGPTDIKGTFEFTDWDKVDGFADTF 171