Pairwise Alignments

Query, 174 a.a., menaquinone-dependent protoporphyrinogen IX dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 177 a.a., protoporphyrinogen oxidase (RefSeq) from Shewanella loihica PV-4

 Score =  123 bits (309), Expect = 1e-33
 Identities = 59/168 (35%), Positives = 97/168 (57%), Gaps = 4/168 (2%)

Query: 4   LLLYSSQEGQTRKIIERIAQQMPE--YDCDIQDLHQVHEIALADYEKILIGASIRYGRLN 61
           L++Y S+ G T KI + IA  +    + CD   + +   I    Y+ + +GA + YG  +
Sbjct: 5   LIVYYSRGGHTAKIAQAIAAHLDAQGHSCDALRIGEFEHIDWEKYDYVAVGACVLYGSYH 64

Query: 62  EKLYQFIQRHVTTLTNSKAAFFCVNLTARKEDQGKDTPEGSVYIQTFLKKSPWQPERIAV 121
           + +++F+ R+   L     +FF VN+ AR  +  K  PE + Y+Q F++ SPW+P  + V
Sbjct: 65  KSVFEFVTRYQAELAAKPNSFFSVNVVARNPE--KRIPENNKYLQKFIELSPWKPNDVKV 122

Query: 122 FAGALYYPRYRWFDKMMIRLIMTLTGGETDTSKEVEYTNWEKVSQFGE 169
            AG + YP +RW+D+ MI+LIM +T G TD    ++YT+WE V  + E
Sbjct: 123 IAGKVDYPSWRWYDRWMIQLIMKITDGPTDPKAVIDYTDWEDVKLYAE 170