Pairwise Alignments

Query, 174 a.a., menaquinone-dependent protoporphyrinogen IX dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 174 a.a., hypothetical flavodoxin (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  141 bits (355), Expect = 7e-39
 Identities = 79/174 (45%), Positives = 108/174 (62%), Gaps = 6/174 (3%)

Query: 1   MKALLLYSSQEGQTRKIIERI---AQQMPEYDCDIQDLHQVHEIALADYEKILIGASIRY 57
           M+ L++YS+ +GQT +I  +I   A++  E    +  L Q   I LAD +K+LIGASIRY
Sbjct: 1   MQTLIIYSTIDGQTLEICRKIKAFAERAGE-KVSLFSLEQAEAINLADVDKVLIGASIRY 59

Query: 58  GRLNEKLYQFIQRHVTTLTNSKAAFFCVNLTARKEDQGKDTPEGSVYIQTFLKKSPWQPE 117
           G+   +LYQF+ R+   L+     FF VN+ ARK    K+TPE + Y+Q FLK S WQP+
Sbjct: 60  GKHRPELYQFVNRNHAVLSAKVNGFFTVNVVARKPL--KNTPETNPYMQKFLKLSLWQPQ 117

Query: 118 RIAVFAGALYYPRYRWFDKMMIRLIMTLTGGETDTSKEVEYTNWEKVSQFGEQF 171
            +AVFAG + YP+Y  FD+ MI  IM +T G TD     E+T+W KV  FG  F
Sbjct: 118 HLAVFAGKIDYPKYGLFDRTMICFIMWMTKGPTDLKGTFEFTDWAKVEAFGTHF 171