Pairwise Alignments

Query, 174 a.a., menaquinone-dependent protoporphyrinogen IX dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 173 a.a., protoporphyrinogen oxidase (RefSeq) from Shewanella sp. ANA-3

 Score =  148 bits (373), Expect = 5e-41
 Identities = 80/171 (46%), Positives = 111/171 (64%), Gaps = 6/171 (3%)

Query: 2   KALLLYSSQEGQTRKIIERIAQQMPEYDCD--IQDLHQVHEIALADYEKILIGASIRYGR 59
           K L+++SS  GQTRKI  ++AQQ+ E      I D+  V   A+  ++KI+IGASIR+G+
Sbjct: 3   KILIIFSSVHGQTRKITNQLAQQLKELGNSVVIADIKAVP--AMESFDKIIIGASIRHGK 60

Query: 60  LNEKLYQFIQRHVTTLTNSKAAFFCVNLTARKEDQGKDTPEGSVYIQTFLKKSPWQPERI 119
            N  LY+FIQ+H   LT   + FF V+L ARK +  K+TPE + Y+Q FL K+ W+P+ +
Sbjct: 61  HNPALYEFIQKHQQILTQKVSGFFSVSLVARKPE--KNTPETNPYMQAFLSKTTWRPKLL 118

Query: 120 AVFAGALYYPRYRWFDKMMIRLIMTLTGGETDTSKEVEYTNWEKVSQFGEQ 170
            VF G L Y  Y   D+ +IR IM LT G TD    VEYT+W+KV+ FG+Q
Sbjct: 119 QVFGGNLNYQGYNALDRNIIRFIMWLTKGPTDPVTNVEYTDWQKVNDFGQQ 169