Pairwise Alignments

Query, 174 a.a., menaquinone-dependent protoporphyrinogen IX dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 184 a.a., protoporphyrinogen oxidase (RefSeq) from Shewanella sp. ANA-3

 Score =  124 bits (312), Expect = 7e-34
 Identities = 62/173 (35%), Positives = 101/173 (58%), Gaps = 8/173 (4%)

Query: 2   KALLLYSSQEGQTRKIIERIAQQMPEYDCDIQDLHQVHEIALA-----DYEKILIGASIR 56
           + L+LY ++ G T KI   IAQQ+      + DL  ++  A       DY+ + +GA + 
Sbjct: 3   RILVLYFTRGGHTAKIANAIAQQLTLRGAKV-DLVDINSAAATKINWPDYQLVALGACVL 61

Query: 57  YGRLNEKLYQFIQRHVTTLTNSKAAFFCVNLTARKEDQGKDTPEGSVYIQTFLKKSPWQP 116
           YG  ++ ++QFI++H   L+    +FFCVN+ AR  +  K  PE + Y+Q F+  SPW P
Sbjct: 62  YGTYDKSVFQFIEQHAPALSALPNSFFCVNVVARNPE--KRIPENNKYLQKFIALSPWTP 119

Query: 117 ERIAVFAGALYYPRYRWFDKMMIRLIMTLTGGETDTSKEVEYTNWEKVSQFGE 169
             + + AG + YP + W+D++MI+LIM +T G TD    ++YT+WE V  + +
Sbjct: 120 TDLKIIAGKVDYPSWPWYDRLMIQLIMKITKGPTDPKAVIDYTDWEDVKVYAD 172