Pairwise Alignments

Query, 849 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1003 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score =  241 bits (616), Expect = 1e-67
 Identities = 143/389 (36%), Positives = 211/389 (54%), Gaps = 10/389 (2%)

Query: 456 LILIGIDKFRDINDSLGHHQADQLLVAIAQRLKVTFPEPALIARIGGDEFAIYLPDVNQQ 515
           ++ + +DKF+ +NDSLGH   D+LL  +AQR+         + R+GGDEF I L D  Q 
Sbjct: 580 VVFLDLDKFKLVNDSLGHSAGDELLKTVAQRMLGCVRRTDTVVRLGGDEFVIILFD--QP 637

Query: 516 DDLKSVATDILKL---FASPFSMPSDNIAVNVSIGIVYL--EEPNMTVWLRNGSIALSNA 570
            DL  V   + K+      P  +    + V  S+G+     +  +    L N   A+  A
Sbjct: 638 SDLDGVTPVLHKIQEAILRPIQLSGHTLHVTCSMGLATYPTDGTDTDTLLSNADAAMYRA 697

Query: 571 KA-EHTHISFYSPEMANASRKRMLMVTQIKLALDNQEFVPFYQPIVDLNSGEVLGAEALA 629
           K        FY+ EM N  + ++ M   ++ AL+N EF+  YQP VDL SG+++G EAL 
Sbjct: 698 KELGRNSFQFYTSEMNNKVQGKLAMQDGLRSALNNDEFLLLYQPQVDLQSGQIIGVEALI 757

Query: 630 RWISPEFGLIPPMDFIPIAEESGLINAIGEQILRQACADTVRGIAENKWPSTFHMHVNLS 689
           RW  PE G++ P+ FIP AEE+GLI  IG+ ++  AC    +   +  WP    M VN+S
Sbjct: 758 RWQHPELGMVSPIKFIPQAEETGLIVPIGDWVIHSACRQN-KAWQDAGWPP-ITMSVNIS 815

Query: 690 VNQLSHPDFIAQLHSVLDESGLQPTNLTLEITESRIVDNDPVILHNMLELKKARIHIAID 749
             Q    D I ++   L ESGL P  L LE+TES I+ +    +  M  L+   I ++ID
Sbjct: 816 ARQFIERDLIDRVMHALQESGLDPMYLELELTESLIMQDLQQAISKMKALQAMGISLSID 875

Query: 750 DFGTGYSSLAYLHKLPFDCLKIDREFVSQLNAYNIENSVVAAIVNMTRGFKVELVAEGIE 809
           DFGTGYSSLA L   P   LKID+ FV  L     + ++  A++++     ++++AEG+E
Sbjct: 876 DFGTGYSSLAALKSFPIARLKIDQSFVRDLPDNENDKAIATAVISLGHKLNLKVIAEGVE 935

Query: 810 TQEQVDLLNQLGCPRGQGFLFSKPMAYQD 838
           T+EQ   L   GC   QG+ FSK ++ Q+
Sbjct: 936 TEEQQTFLRDNGCDEIQGYFFSKAVSAQE 964