Pairwise Alignments

Query, 849 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 790 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score =  250 bits (638), Expect = 3e-70
 Identities = 136/382 (35%), Positives = 213/382 (55%), Gaps = 5/382 (1%)

Query: 456 LILIGIDKFRDINDSLGHHQADQLLVAIAQRLKVTFPEPALIARIGGDEFAIYLPDVNQQ 515
           ++ + +D+F+ +ND+LGH   DQLL  +A RLK        +AR+GGDEF I LP+++  
Sbjct: 391 VLFLDLDRFKQVNDTLGHDAGDQLLKEVALRLKACLRTSDTVARLGGDEFVILLPELSDD 450

Query: 516 DDLKSVATDILKLFASPFSMPSDNIAVNVSIGIVYLEEPNMT--VWLRNGSIALSNAK-A 572
            D+ + A  +L   A PF++      V  S+GI    +  +      +N  IA+  AK  
Sbjct: 451 KDVATAAQKVLGAIARPFNLQGQEFRVTASVGISVFPQDGLDEQTLKKNADIAMYQAKQC 510

Query: 573 EHTHISFYSPEMANASRKRMLMVTQIKLALDNQEFVPFYQPIVDLNSGEVLGAEALARWI 632
              +  FYS ++   S +RM +   ++ AL+  EF   YQ   D+ SG + G EAL RW 
Sbjct: 511 GKNNFQFYSAKLNADSLERMTLELSLRHALERHEFQLHYQAKRDIGSGRITGMEALLRWN 570

Query: 633 SPEFGLIPPMDFIPIAEESGLINAIGEQILRQACADTVRGIAENKWPSTFHMHVNLSVNQ 692
            P+ G++ PM FIP+AEE+GLI  IG+ +L+ AC   V    + +      + VNL+  Q
Sbjct: 571 HPDLGIVAPMQFIPVAEETGLIVPIGKWVLKTACQQNVAW--QQQGLPCLGVAVNLTARQ 628

Query: 693 LSHPDFIAQLHSVLDESGLQPTNLTLEITESRIVDNDPVILHNMLELKKARIHIAIDDFG 752
            +  + +  L  +L E+G+    L LEI ES ++ +    L+ +  LK  ++ IAIDDFG
Sbjct: 629 FADENLLTDLAGILAETGMDARLLELEIAESLLMQDVKKALNVLTGLKHLKVRIAIDDFG 688

Query: 753 TGYSSLAYLHKLPFDCLKIDREFVSQLNAYNIENSVVAAIVNMTRGFKVELVAEGIETQE 812
            GYSSL+ L + P D +KIDR  +   ++ + + ++  AI+ M R   + +VA+G+ET+E
Sbjct: 689 IGYSSLSALEQFPLDVIKIDRSCICDTSSVSEDKALTEAIIAMGRTLSLTVVAQGVETKE 748

Query: 813 QVDLLNQLGCPRGQGFLFSKPM 834
           Q D L    C   QGF F+KP+
Sbjct: 749 QADFLRDNACDEFQGFYFNKPV 770