Pairwise Alignments

Query, 849 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., GGDEF domain protein from Pseudomonas fluorescens FW300-N1B4

 Score =  241 bits (614), Expect = 1e-67
 Identities = 160/479 (33%), Positives = 250/479 (52%), Gaps = 29/479 (6%)

Query: 388 GDWTASM---PKPGKIY---ETSLLVQ----------AFIEMTNSLKASFKALRSQLVYD 431
           G+W+  +    K G+IY   +T  L++          A     +++K S   L     +D
Sbjct: 156 GEWSGEIWNRRKNGEIYPQWQTIRLIRDDQGRLSQYVAVFSDISAIKNSEHELTHLAHHD 215

Query: 432 SLTQLLSREGLVEHCHQ------IPQLNGGLILIGIDKFRDINDSLGHHQADQLLVAIAQ 485
            LT L +R  L +   Q      + +    L++I +D F+ INDSLGH   DQLL A+A+
Sbjct: 216 PLTDLPNRLLLTDRAGQAVASAQVHKRGCALLMIDLDHFKLINDSLGHSVGDQLLKAVAE 275

Query: 486 RLKVTFPEPALIARIGGDEFAIYLPDVNQQDDLKSVATDILKLFASPFSMPSDNIAVNVS 545
           RL   F     +AR+ GDEFA+   +  Q     ++A  ++     PF +    + +N S
Sbjct: 276 RLNALFGPGNTLARLSGDEFAVLTENCPQPGHAAALAQRVIDGLKEPFQIDGHPLFINAS 335

Query: 546 IGIVYLEEPNMTV--WLRNGSIALSNAK-AEHTHISFYSPEMANASRKRMLMVTQIKLAL 602
           IGI       ++    LRN   AL  AK A     + Y+ E+   +++R+ +  Q++ AL
Sbjct: 336 IGISLFPSDALSAEQLLRNADSALFKAKSAGRDGYALYTEELTAHAQQRVEIAFQLRRAL 395

Query: 603 DNQEFVPFYQPIVDLNSGEVLGAEALARWISPEFGLIPPMDFIPIAEESGLINAIGEQIL 662
           + Q+   +YQP+ DL +  ++G EAL RW  P+ GL+ P +FIPIAE +GLI  I   I+
Sbjct: 396 EQQQLRVYYQPVHDLKTSRLIGVEALVRWEHPQRGLVSPAEFIPIAERTGLIAEIDAWIM 455

Query: 663 RQACADTVRGIAENKWPSTFHMHVNLSVNQLSHPDFIAQLHSVLDESGLQPTNLTLEITE 722
           RQAC    +  A     S   + VN+S    +  +   Q+  VL ++GL P  L LE+TE
Sbjct: 456 RQACQQMCQWQAAGVVLS--FVAVNVSSRLFARRELYQQVAQVLHDTGLDPAYLELEVTE 513

Query: 723 SRIVDNDPVILHNMLELKKARIHIAIDDFGTGYSSLAYLHKLPFDCLKIDREFVSQLNAY 782
           S ++++  + L  M  L++  + +AIDDFGTGYSSL  L +LP   LKID+ FV+ L   
Sbjct: 514 SAVMEDPEMALEQMHRLRELGVRLAIDDFGTGYSSLLRLKRLPVQKLKIDQGFVAGLPGD 573

Query: 783 NIENSVVAAIVNMTRGFKVELVAEGIETQEQVDLLNQLGCPRGQGFLFSKPM--AYQDW 839
             + ++   I+ + +   +++ AEGIE  EQ   L +  C  GQG+ F +P+  A  DW
Sbjct: 574 EDDAAIARVIIALAQSMGMQVHAEGIEQVEQASFLFEHDCDLGQGYWFGRPVPAASLDW 632