Pairwise Alignments

Query, 849 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 950 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  251 bits (642), Expect = 1e-70
 Identities = 153/437 (35%), Positives = 241/437 (55%), Gaps = 11/437 (2%)

Query: 407 VQAFIEMTNSLKASFKALRSQLVYDSLTQLLSR----EGLVEHCHQIPQ--LNGGLILIG 460
           V AFI   +  +   + LR    YD LT L +R    E L E C ++ +   N  ++ I 
Sbjct: 506 VVAFISDLSVRRKIEERLRYLTHYDDLTGLANRGLFKERLHEACQRVRRNGRNMAVLYID 565

Query: 461 IDKFRDINDSLGHHQADQLLVAIAQRLKVTFPEPALIARIGGDEFAIYLPDVNQQDDLKS 520
           +D+F+ +N+SLGH  AD LL  +++RL  T  E   IAR+ GDEF + L        L  
Sbjct: 566 LDRFKLLNESLGHEAADALLREVSRRLSTTLAEADTIARLSGDEFVVLLDAYGSLSSLAH 625

Query: 521 VATDILKLFASPFSMPSDNIAVNVSIGIVYLEEPNMTV--WLRNGSIALSNAK-AEHTHI 577
           + + +L+    P  +    + ++ SIG+  L + +      LR  +IA+  AK      +
Sbjct: 626 LGSRLLQRIRKPMVIDEQELVISASIGVSLLPDNSRDAEALLRQANIAMQQAKHLGGNTL 685

Query: 578 SFYSPEMANASRKRMLMVTQIKLALDNQEFVPFYQPIVDLNSGEVLGAEALARWISPEFG 637
            F++     +S   + +  Q++ AL+  +   FYQP + L    +  AEAL RW  PE G
Sbjct: 686 QFFTDRPQASSMHYLQLENQLRKALEVGQLEVFYQPRLSLADDSLEAAEALVRWRHPELG 745

Query: 638 LIPPMDFIPIAEESGLINAIGEQILRQACADTVRGIAENKWPSTFHMHVNLSVNQLSHPD 697
           L+ P  FIP+AEE+GLI  +GE +LR+AC    +   +    +   + VNLSV QL   +
Sbjct: 746 LVAPAQFIPLAEETGLIIPLGEFVLREACRQARQWQQDGL--AAIRVSVNLSVKQLRQGN 803

Query: 698 FIAQLHSVLDESGLQPTNLTLEITESRIVDNDPVILHNMLELKKARIHIAIDDFGTGYSS 757
           F++ +  VL+E+GL  T L LE+TES+++D+    +    +L+   + +AIDDFGTG+SS
Sbjct: 804 FVSLVRQVLEETGLPATMLELELTESQLLDDIDNAISISEQLRALGVKLAIDDFGTGFSS 863

Query: 758 LAYLHKLPFDCLKIDREFVSQLNAYNIENSVVAAIVNMTRGFKVELVAEGIETQEQVDLL 817
           L+YL + P D +KIDR F+S+L   + + ++  AI+ M    + ++VAEG+ETQ Q+D L
Sbjct: 864 LSYLKRFPVDYVKIDRSFISELEHSSQDAAITRAIIAMVHSLERKVVAEGVETQAQMDFL 923

Query: 818 NQLGCPRGQGFLFSKPM 834
               C   QG+L S P+
Sbjct: 924 KANHCDEIQGYLLSPPV 940