Pairwise Alignments

Query, 849 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 852 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  250 bits (639), Expect = 2e-70
 Identities = 147/417 (35%), Positives = 227/417 (54%), Gaps = 14/417 (3%)

Query: 430 YDSLTQLLSREGLVEHCHQ-IPQLNGG----LILIGIDKFRDINDSLGHHQADQLLVAIA 484
           +D LT L +R  L ++  Q +  L  G    L+ I +D+F+ +ND+LGH   D++L+ +A
Sbjct: 433 HDPLTGLPNRSRLRDYLEQNLASLRSGSTMTLLYIDLDRFKPVNDTLGHAAGDEVLMGVA 492

Query: 485 QRLKVTFPEPALIARIGGDEFAIYLPDVNQQDDLKSVATDILKLFASPFSMPSDNIAVNV 544
            RL+    +  L+AR+GGDEF + L  +++ +D+  +   I++  +SPF+  +  I++  
Sbjct: 493 SRLRERTRDGDLVARLGGDEFVVALHRMSEDEDIDRLCNRIIEALSSPFAYENHQISIGA 552

Query: 545 SIGIVY--LEEPNMTVWLRNGSIALSNAK-AEHTHISFYSPEMANASRKRMLMVTQIKLA 601
           SIG+    ++       LR   IAL  AK A       Y  +M     +R+    Q+++A
Sbjct: 553 SIGVALAPMDATQANELLRCADIALYQAKDAGRGTWRAYGRDMDQRLHERLRREEQLRVA 612

Query: 602 LDNQEFVPFYQPIVDLNSGEVLGAEALARWISPEFGLIPPMDFIPIAEESGLINAIGEQI 661
           +  Q     YQP        ++GAEAL RW  P  GL+ P  FIP+AEE+GLI  +G  +
Sbjct: 613 IAEQHLEVHYQPRYLSQGMRIIGAEALVRWHHPTHGLLLPEQFIPLAEETGLIIPLGRWV 672

Query: 662 LRQACADTVRGIAENKWPSTFHMHVNLSVNQLSHPDFIAQLHSVLDESGLQPTNLTLEIT 721
           L+QAC           WP    + VNLS  QL     + ++   L E+GL    L LEIT
Sbjct: 673 LQQACQQAAT------WPVDMVVSVNLSPLQLHDDRLLDEISQALHENGLAGERLELEIT 726

Query: 722 ESRIVDNDPVILHNMLELKKARIHIAIDDFGTGYSSLAYLHKLPFDCLKIDREFVSQLNA 781
           ES ++      L  +  +K   +H+A+DDFGTGYSSL  L   PFD +KID  FV+ +  
Sbjct: 727 ESALLQETQSTLDLLKRIKALGVHLAVDDFGTGYSSLTSLRHYPFDVIKIDNSFVAGIEQ 786

Query: 782 YNIENSVVAAIVNMTRGFKVELVAEGIETQEQVDLLNQLGCPRGQGFLFSKPMAYQD 838
              ++S+V A++ + RG ++ + AEG+ET+EQ+ LL   GC   QGF  S PM  ++
Sbjct: 787 SMEDHSIVRALIELGRGLQMRVTAEGVETEEQLRLLTDDGCTEVQGFHMSLPMPAEE 843