Pairwise Alignments

Query, 849 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Pseudomonas syringae pv. syringae B728a

 Score =  249 bits (636), Expect = 4e-70
 Identities = 152/444 (34%), Positives = 241/444 (54%), Gaps = 14/444 (3%)

Query: 407 VQAFIEMTNSLKASFKALRSQLVYDSLTQLLSREGLVEHCHQI------PQLNGGLILIG 460
           V  F ++T ++K S + L     YD+LT+L +R  L +   Q        +    L+++ 
Sbjct: 192 VAVFSDIT-AIKRSEQELAQLAHYDALTELPNRLLLTDRISQALTSARSSRRGCALLVVD 250

Query: 461 IDKFRDINDSLGHHQADQLLVAIAQRLKVTFPEPALIARIGGDEFAIYLPDVNQQDDLKS 520
           +D FR+INDSLGH+  D++L A A+RL         ++R+GGDEFA+ + +        +
Sbjct: 251 LDNFRNINDSLGHNIGDEVLKAAAERLNALADSGMTVSRLGGDEFALLVKNCTHMVHAAA 310

Query: 521 VATDILKLFASPFSMPSDNIAVNVSIGIVYLEEPNMTV--WLRNGSIALSNAKAEHTH-I 577
           +A  ++  F +P+ +    + V  SIGI       +T    LRN   AL  AK +     
Sbjct: 311 LAQQVINAFKAPYPIAGHQLFVTASIGISLFPGDALTAEQLLRNADSALFKAKTDGREGF 370

Query: 578 SFYSPEMANASRKRMLMVTQIKLALDNQEFVPFYQPIVDLNSGEVLGAEALARWISPEFG 637
           + Y+ E+   +++R+ + ++++ A++  E   FYQP+ DL +G +   EAL RW  P  G
Sbjct: 371 ALYTEELTAQAQQRVQLASELRQAIEQDELRVFYQPVYDLVTGRICAVEALVRWQHPTRG 430

Query: 638 LIPPMDFIPIAEESGLINAIGEQILRQACADTVRGIAENKWPSTFHMHVNLSVNQLSHPD 697
           ++ P DFIPIAE++GLI  I   +L  AC      +AE    S   + VN+S    S  D
Sbjct: 431 MVSPGDFIPIAEQNGLIADIDAWVLNTACRQMQAWLAEGV--SIASVAVNVSSRLFSRGD 488

Query: 698 FIAQLHSVLDESGLQPTNLTLEITESRIVDNDPVILHNMLELKKARIHIAIDDFGTGYSS 757
              Q+  VL+E+GL P  L LE+TES ++++    +  +  L++  + +AIDDFGTGYSS
Sbjct: 489 VDRQVAEVLNETGLDPAFLELEVTESAVMEDPEQAIEQLHRLRELGLSLAIDDFGTGYSS 548

Query: 758 LAYLHKLPFDCLKIDREFVSQLNAYNIENSVVAAIVNMTRGFKVELVAEGIETQEQVDLL 817
           L  L  +P   LKID+ FV+ L     + ++V A++ +     + ++AEGIE   Q   L
Sbjct: 549 LLRLKSMPVQKLKIDQGFVAGLPGDVDDIAIVRAVIALASSLGMRVLAEGIEHANQASFL 608

Query: 818 NQLGCPRGQGFLFSKPMAYQ--DW 839
              GC  GQG+ F++PMA Q  DW
Sbjct: 609 LSNGCELGQGYWFARPMAAQSIDW 632