Pairwise Alignments

Query, 849 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 917 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Synechococcus elongatus PCC 7942

 Score =  276 bits (707), Expect = 3e-78
 Identities = 157/426 (36%), Positives = 238/426 (55%), Gaps = 11/426 (2%)

Query: 418 KASFKALRSQLVYDSLTQLLSREGLVEHCHQIPQLNGG------LILIGIDKFRDINDSL 471
           K + + L  Q  YDSLT L +R   ++   Q   L+        ++L+ +D+F++IND+L
Sbjct: 475 KRNRELLDHQANYDSLTDLPNRSLALDRLRQATALSERSNDTVIVMLLDLDRFKNINDTL 534

Query: 472 GHHQADQLLVAIAQRLKVTFPEPALIARIGGDEFAIYLPDVNQQDDLKSVATDILKLFAS 531
           GH   D LL  IA+RL+   P    I+R+GGDEF I  P V +   L+ ++  +LK+ + 
Sbjct: 535 GHSYGDCLLQEIAKRLRYHLPREITISRLGGDEFLIICPAVKENIHLEKLSQQLLKIISQ 594

Query: 532 PFSMPSDNIAVNVSIGIVYLEEPNMT--VWLRNGSIALSNAKAEHTH-ISFYSPEMANAS 588
           P ++ ++ + +  SIG+       +T  V +RN   A+ +AK    +    + P M   +
Sbjct: 595 PITIEAEELVITASIGVACYPNDGVTPEVLMRNADTAMYSAKRNGGNDFQLFMPTMNAEA 654

Query: 589 RKRMLMVTQIKLALDNQEFVPFYQPIVDLNSGEVLGAEALARWISPEFGLIPPMDFIPIA 648
             R+ + T ++ AL+  +   FYQPI+ L    V+G EALARW  PE G IPP  FIPIA
Sbjct: 655 HARIQLETHLRHALEQYQLKVFYQPIISLQDNHVVGLEALARWHDPELGNIPPDRFIPIA 714

Query: 649 EESGLINAIGEQILRQACADTVRGIAENKWPSTFHMHVNLSVNQLSHPDFIAQLHSVLDE 708
           EE+GLI  +G +++ QAC D    I + K+   F + VNLS  QL    F      +L  
Sbjct: 715 EETGLIIPLGYRVIEQACQDVA--IWQQKYNYPFWVAVNLSPRQLRSNRFTQITAKILQR 772

Query: 709 SGLQPTNLTLEITESRIVDNDPVILHNMLELKKARIHIAIDDFGTGYSSLAYLHKLPFDC 768
              +P  L LE+TE  ++DN   I   +  L +  I +A+DDFGTGYS+L+YL + PF  
Sbjct: 773 HNFRPNYLKLEVTEQMLLDNTSTIAQMLDTLHRKGIALALDDFGTGYSALSYLRRYPFQS 832

Query: 769 LKIDREFVSQLNAYNIENSVVAAIVNMTRGFKVELVAEGIETQEQVDLLNQLGCPRGQGF 828
           LK+D+ F+  +       ++V  IV M  G  ++ VAEG+ET EQV+ L  +GC  GQG+
Sbjct: 833 LKVDQSFLRDIPHSTESCALVKTIVAMAHGLGMQAVAEGVETAEQVEFLKAIGCEYGQGY 892

Query: 829 LFSKPM 834
            FS+P+
Sbjct: 893 WFSRPL 898