Pairwise Alignments

Query, 849 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 929 a.a., response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Synechococcus elongatus PCC 7942

 Score =  242 bits (618), Expect = 6e-68
 Identities = 137/391 (35%), Positives = 229/391 (58%), Gaps = 17/391 (4%)

Query: 456 LILIGIDKFRDINDSLGHHQADQLLVAIAQRLKVTFPEPALIARIGGDEFAIYLPDVNQQ 515
           ++ I +D F+ INDS+GH   D LLV +AQR+         +ARIGGDEF I L D+  +
Sbjct: 532 ILFIDLDGFKLINDSIGHRSGDLLLVEVAQRMCEQVRAGDTVARIGGDEFIILLVDLKLE 591

Query: 516 DDLKSVATDILKLFASPFSMPSDNIAVNVSIGIVY----LEEPNMTVWLRNGSIALSNAK 571
           +D+ S+A  +L   A P+ +    + V  S+GI      +E+P  T  ++   +A+  AK
Sbjct: 592 NDVISIADRLLASVARPYHIQGIYLHVTASMGITLSDGDIEQP--TQLIQQADLAMYKAK 649

Query: 572 AE-HTHISFYSPEMANASRKRMLMVTQIKLALDNQEFVPFYQPIVDLNSGEVLGAEALAR 630
            E   +  +Y+ ++    R+R+ +  +++ A++ + F  ++QP ++  SG+V+G EAL R
Sbjct: 650 QEGRNNYQWYTNDLNLRLRERVHLRNELQKAIETEAFELYFQPKIEGCSGQVIGLEALLR 709

Query: 631 WISPEFGLIPPMDFIPIAEESGLINAIGEQILRQACADT----VRGIAENKWPSTFHMHV 686
           W  P+ G I P  F+PIAE++G I  + + +L  AC        +GIA    PS   + V
Sbjct: 710 WQHPQMGFISPATFVPIAEDTGQIIPLSQWVLETACRQLRDLLQQGIAA---PS---VAV 763

Query: 687 NLSVNQLSHPDFIAQLHSVLDESGLQPTNLTLEITESRIVDNDPVILHNMLELKKARIHI 746
           N+S  Q    +F+  + S L +  L+  +L +EITE+ + DN    +  +  LK+  ++I
Sbjct: 764 NISTVQFRRINFVKSVQSALQKYQLKSEHLEIEITENVLFDNTEKAIEKLQRLKELGVNI 823

Query: 747 AIDDFGTGYSSLAYLHKLPFDCLKIDREFVSQLNAYNIENSVVAAIVNMTRGFKVELVAE 806
           +IDDFGTG+SSL+YL +LP D +KIDR FV ++N  + + ++   I++M    ++ +VAE
Sbjct: 824 SIDDFGTGFSSLSYLKELPIDTVKIDRSFVQEINTDSRDAAITQGIISMAHHLRLNVVAE 883

Query: 807 GIETQEQVDLLNQLGCPRGQGFLFSKPMAYQ 837
           G+ET++Q   L Q  C + QG+ F+KPM ++
Sbjct: 884 GVETEQQFKFLQQSNCDQYQGYYFAKPMPFE 914