Pairwise Alignments

Query, 849 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1047 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) from Synechococcus elongatus PCC 7942

 Score =  279 bits (714), Expect = 5e-79
 Identities = 160/425 (37%), Positives = 241/425 (56%), Gaps = 10/425 (2%)

Query: 424  LRSQLVYDSLTQLLSREGLVEHCH-------QIPQLNGGLILIGIDKFRDINDSLGHHQA 476
            L+    +DSLT L +R  L+E          ++      ++ + +D+F+ INDSLGH   
Sbjct: 615  LQYDACHDSLTGLANRNLLIERLELSLKRSKRLQNYKYAVLFLDLDRFKVINDSLGHITG 674

Query: 477  DQLLVAIAQRLKVTFPEPALIARIGGDEFAIYLPDVNQQDDLKSVATDILKLFASPFSMP 536
            DQLLV+IAQ+L+       L AR+GGDEF + + D+   D+   VA  IL     P  + 
Sbjct: 675  DQLLVSIAQKLQSIIRSHDLAARLGGDEFVVLVEDIQTFDEPIKVAERILAAIQVPLELE 734

Query: 537  SDNIAVNVSIGIVY--LEEPNMTVWLRNGSIALSNAKAE-HTHISFYSPEMANASRKRML 593
              +I  + SIGIV+   E  + T  LR+   A+  AK+        +   M + +  R+ 
Sbjct: 735  ERSIYTSTSIGIVFGSHEYESATQLLRDADTAMYRAKSRGRARYEVFDSAMHSQALARLH 794

Query: 594  MVTQIKLALDNQEFVPFYQPIVDLNSGEVLGAEALARWISPEFGLIPPMDFIPIAEESGL 653
            +   ++ A+  QEFV +YQPI+ L +G++ G EAL RW  P  G+  P+D IPIAEE+GL
Sbjct: 795  LENDLRQAIARQEFVLYYQPIIQLQTGKITGFEALIRWQHPTEGIKLPIDLIPIAEETGL 854

Query: 654  INAIGEQILRQACADTVRGIAENKWPSTFHMHVNLSVNQLSHPDFIAQLHSVLDESGLQP 713
            I +I   +L QAC       A     +   M VNLS   L H   + ++ SVL  + ++P
Sbjct: 855  ITSIDYWVLNQACRQLSEWQASYSQAADLSMSVNLSAQNLQHDHLMDEIQSVLQATKIKP 914

Query: 714  TNLTLEITESRIVDNDPVILHNMLELKKARIHIAIDDFGTGYSSLAYLHKLPFDCLKIDR 773
             +LTLEITES +++N    +  +  + +  I I+IDDFGTGYSSL+YLHKLP + LK+D 
Sbjct: 915  GSLTLEITESMLIENTDQTIQLLAAINEQGIEISIDDFGTGYSSLSYLHKLPVNNLKVDG 974

Query: 774  EFVSQLNAYNIENSVVAAIVNMTRGFKVELVAEGIETQEQVDLLNQLGCPRGQGFLFSKP 833
             FV ++   +    +V  I+ +     ++ +AEGIET EQ+DLL+QLG   GQG+LF++P
Sbjct: 975  SFVRKITTESTNYQIVNTIIALNNQLGLKAIAEGIETHEQLDLLSQLGYQYGQGYLFARP 1034

Query: 834  MAYQD 838
            +  +D
Sbjct: 1035 LNAKD 1039