Pairwise Alignments

Query, 849 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 751 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  252 bits (643), Expect = 6e-71
 Identities = 158/461 (34%), Positives = 260/461 (56%), Gaps = 16/461 (3%)

Query: 387 NGDWTASMPKPGKIYETSLLVQAFIEMTN--SLKASFKALRSQLVY-DSLTQLLSREGLV 443
           NG   A       +Y     V+ F+ + +  SL    +A  +QL + D LT+L +R  L 
Sbjct: 282 NGTLFAEQTSISAVYGEDGQVRCFVAVFSDISLLKQTEAEVAQLAWHDPLTRLPNRSKLT 341

Query: 444 EHCHQIPQLNGG------LILIGIDKFRDINDSLGHHQADQLLVAIAQRLKVTFPEPALI 497
               Q  +L         L+LI +D F+ INDS GH   D++L+++++RL         +
Sbjct: 342 TISQQQIKLAANRKTRLALLLIDVDLFKHINDSFGHLAGDKVLLSLSERLAALLGAEDTL 401

Query: 498 ARIGGDEFAIYLPDVNQQDDLKSVATDILKLFASPF-SMPSDNIAVNVSIGI-VYLEE-P 554
           ARIGGDEF + L  V ++DD+  + + I + F + F +   +++ ++ SIGI VY ++  
Sbjct: 402 ARIGGDEFVL-LTQVRRRDDIPVILSAIQRAFDTSFDTSEGESVRLSASIGIAVYPDDGD 460

Query: 555 NMTVWLRNGSIALSNAKAE-HTHISFYSPEMANASRKRMLMVTQIKLALDNQEFVPFYQP 613
           N    L+N   A+  AK +     +FY+ +M  +S +++ + T ++ A+ N      YQP
Sbjct: 461 NPDTLLKNADAAMYRAKQQGRNRHAFYTEQMTQSSMQQLRLQTALRGAVKNSALSLVYQP 520

Query: 614 IVDLNSGEVLGAEALARWISPEFGLIPPMDFIPIAEESGLINAIGEQILRQACADTVRGI 673
            ++L + +++G EAL RW   E G++ P +FIP+AE  GL+  IG  +L++AC      I
Sbjct: 521 KINLRTRKLIGVEALCRWTDHELGVVSPAEFIPVAESIGLMPEIGLWVLKEACRQA--RI 578

Query: 674 AENKWPSTFHMHVNLSVNQLSHPDFIAQLHSVLDESGLQPTNLTLEITESRIVDNDPVIL 733
             ++  +   M VN+S +QL+  +F   +  VL ++GL P  L LEITES ++DN    +
Sbjct: 579 WRDQGLNPGRMAVNVSGSQLTGDNFADSVARVLTQTGLSPDALELEITESVVLDNPASAI 638

Query: 734 HNMLELKKARIHIAIDDFGTGYSSLAYLHKLPFDCLKIDREFVSQLNAYNIENSVVAAIV 793
             M +L+   + +A+DDFGTGYSSL+YL KLP + LKID+ FV +L       ++  AI+
Sbjct: 639 DTMDKLRGMGVSLALDDFGTGYSSLSYLRKLPLNKLKIDQSFVRELPTDQDSGAIAMAII 698

Query: 794 NMTRGFKVELVAEGIETQEQVDLLNQLGCPRGQGFLFSKPM 834
            M    K+ ++AEG+E + Q + L +LGC   QG+LF++P+
Sbjct: 699 AMGEALKLGVIAEGVENETQAEFLLRLGCTEAQGYLFARPL 739