Pairwise Alignments

Query, 849 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1061 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score =  250 bits (639), Expect = 3e-70
 Identities = 149/395 (37%), Positives = 212/395 (53%), Gaps = 9/395 (2%)

Query: 455  GLILIGIDKFRDINDSLGHHQADQLLVAIAQRLKVTFPEPALIARIGGDEFAIYLPDVNQ 514
            G++ I +D F+++NDSLGH   D+LL A+AQRL+        ++R GGDEF + LPD+N 
Sbjct: 665  GVLFIDLDHFKNVNDSLGHAVGDKLLTAVAQRLREVARPGDTLSRQGGDEFLMLLPDLNG 724

Query: 515  QDDLKSVATDILKLFASPFSMPSDNIAVNVSIGIVYLEEPNMTV--WLRNGSIALSNAKA 572
             +    VA  IL   A PFS+    I +  SIGI +      +    LRN   A+  AK 
Sbjct: 725  SEAGHGVAQAILTALAPPFSIDGREIYMAASIGITFFPRDGRSAAELLRNADSAMYTAKE 784

Query: 573  EHTH-ISFYSPEMANASRKRMLMVTQIKLALDNQEFVPFYQPIVDLNSGEVLGAEALARW 631
               + I F+SPEM   + +R+ +   ++ AL ++E    YQP+V  +    +GAEAL RW
Sbjct: 785  SGRNAICFFSPEMEIRAAQRLAIEGALRQALAHEELRVAYQPLVRTSDARPIGAEALLRW 844

Query: 632  ISPEFGLIPPMDFIPIAEESGLINAIGEQILRQACADTVRGIAENKWPSTFHMHVNLSVN 691
             SP  G + P +FI +AEE+GLI  IG  +L QA A+  R  AE      F + VN+SV 
Sbjct: 845  TSPTLGEVSPTEFIKVAEETGLIVPIGAWVLDQAVAEAARLRAEGY--GAFQIAVNVSVR 902

Query: 692  QLSHPDFIAQLHSVLDESGLQPTNLTLEITESRIVDNDPVILHNMLELKKARIHIAIDDF 751
            Q    D    +   L         L LE+TES ++D  P I   +  L    + +++DDF
Sbjct: 903  QFRGGDLAGLVSDTLKRHDFPAAGLELELTESLLLDVTPAITTTLQSLSALGVRLSLDDF 962

Query: 752  GTGYSSLAYLHKLPFDCLKIDREFVSQLNAYNIENSVVAAIVNMTRGFKVELVAEGIETQ 811
            GTGYS+L+YL   PFD LK+DR F+  +++     ++  AI+ M RG  +  + EG+ET+
Sbjct: 963  GTGYSALSYLKTFPFDILKVDRSFIRDISSAPDSGALARAIIAMARGLGLATIVEGVETE 1022

Query: 812  EQVDLLNQLGCPRGQGFLFSKPMAYQDWPTDLVNM 846
            EQ        C   QGFLF K M     P DL  M
Sbjct: 1023 EQCAFARAEDCDIMQGFLFGKAMT----PADLRRM 1053