Pairwise Alignments

Query, 849 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1010 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  253 bits (645), Expect = 5e-71
 Identities = 153/462 (33%), Positives = 254/462 (54%), Gaps = 24/462 (5%)

Query: 398  GKIYETSLLVQAFIEMTNSLKASFKALRSQLVYDSLTQLLSREGLVEHCH-QIPQLNGG- 455
            G++Y     V  F ++T   +A    +  Q  YD LT L +R  L+E+ + +I +++   
Sbjct: 555  GQVYRR---VALFSDITEKKEAEH-IIWKQANYDPLTGLPNRRMLLEYLNTEILRIDRNH 610

Query: 456  ----LILIGIDKFRDINDSLGHHQADQLLVAIAQRLKVTFPEPALIARIGGDEFAIYLPD 511
                L+ + +D F+++ND+LGH   D LL   A+RLK    E  ++AR+GGDEF + L  
Sbjct: 611  SHFALMFLDLDFFKEVNDTLGHDMGDLLLQETAKRLKGCIRESDVVARLGGDEFTVVLSG 670

Query: 512  VNQQDDLKSVATDILKLFASPFSMPSDNIAVNVSIGIVYLEEPNMTV--WLRNGSIALSN 569
            ++    ++ VA  IL+  A P+S+  +   ++ SIGI    +   ++   L++   A+  
Sbjct: 671  IDSPSGVERVAQSILERIAEPYSLGDETAYISASIGITIYPDDATSIEGLLKHADQAMYA 730

Query: 570  AKAE-HTHISFYSPEMANASRKRMLMVTQIKLALDNQEFVPFYQPIVDLNSGEVLGAEAL 628
            AK +      +++P M   +R RM ++  ++ A++ +EF  FYQPIVD+N   V  AEAL
Sbjct: 731  AKEQGRNRFHYFTPSMQEYARYRMALIKDLRNAINRKEFELFYQPIVDMNKLGVYKAEAL 790

Query: 629  ARWISPEFGLIPPMDFIPIAEESGLINAIGEQILRQACADTVRGIAENKWPSTFHMHVNL 688
             RW+ P+ GL+ P +FIP+AEE+GLIN IG  +  +A   + R      W +   + + +
Sbjct: 791  IRWVHPQRGLVSPGEFIPVAEETGLINEIGNWVFEKAAQQSAR------WRTQHGVEIQI 844

Query: 689  SVNQL-----SHPDFIAQLHSVLDESGLQPTNLTLEITESRIVDNDPVILHNMLELKKAR 743
            S+N+         D  +   ++L    L    + +EITE  ++D    +   +L  + A 
Sbjct: 845  SINKSPIQFRDEGDTFSDWLALLRHLELSSNAICVEITEGLLLDASMGVTDKLLAYRDAG 904

Query: 744  IHIAIDDFGTGYSSLAYLHKLPFDCLKIDREFVSQLNAYNIENSVVAAIVNMTRGFKVEL 803
            I +++DDFGTGYSSLAYL K   D LKID+ F   L + +   ++  AI+ M     +++
Sbjct: 905  IQVSLDDFGTGYSSLAYLKKFDIDYLKIDQSFTRNLESDSDGVALCEAIIVMAHKLGIKV 964

Query: 804  VAEGIETQEQVDLLNQLGCPRGQGFLFSKPMAYQDWPTDLVN 845
            +AEG+ETQ Q D+L   GC   QG+L+SKP++  ++    VN
Sbjct: 965  IAEGVETQFQHDILASAGCDFAQGYLYSKPVSLPEFERLYVN 1006