Pairwise Alignments

Query, 849 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 816 a.a., response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  258 bits (659), Expect = 1e-72
 Identities = 154/429 (35%), Positives = 242/429 (56%), Gaps = 9/429 (2%)

Query: 416 SLKASFKALRSQLVYDSLTQLLSREGLVEHCHQIPQLNGG--LILIGIDKFRDINDSLGH 473
           SLK S  A   QL  D   ++L  + +   C      +    L+LI ID F+ +NDSLGH
Sbjct: 386 SLKMSHLANHDQLT-DLPNRILLHDRINHACAVADSYDKSVALMLIDIDHFKYLNDSLGH 444

Query: 474 HQADQLLVAIAQRLKVTFPEPALIARIGGDEFAIYLPDVNQQDDLKSVATDILKLFASPF 533
              DQ++  +A+RL+      A + RIGGDEF + LP +     + S+ATDI++   +PF
Sbjct: 445 SYGDQVIKQVAKRLQSLIDPNATLGRIGGDEFVLLLPSLTATSQVDSIATDIVRSLNTPF 504

Query: 534 SMPSDNIAVNVSIGIVYLEEPNMTV--WLRNGSIALSNAK-AEHTHISFYSPEMANASRK 590
            +      ++VS+GI       +     + +   A+  AK        ++S ++     K
Sbjct: 505 RIDGQEYTLSVSVGISIYPSDALRAEELMTHVDAAMYRAKDLGRNRFCYFSEDLEQELTK 564

Query: 591 RMLMVTQIKLALDNQEFVPFYQPIVDLNSGEVLGAEALARWISPEFGLIPPMDFIPIAEE 650
           R  +VT ++ A+D +    +YQP VDL + E++GAEALAR   P   LI P+DFIP+AEE
Sbjct: 565 RHELVTLLRTAIDTEAIEVYYQPKVDLKTKEIIGAEALARLYDPSGKLISPLDFIPLAEE 624

Query: 651 SGLINAIGEQILRQACADTVRGIAENKWPSTFHMHVNLSVNQLSHPDFIAQLHSVLDESG 710
           +GLI+ +GE IL+Q+C   +   A  K      + VN++  Q ++P+F   +  VL+ +G
Sbjct: 625 TGLIHQLGEIILKQSC---MAAKAWQKRGRPLQIAVNIAAKQFTNPEFCDSVAKVLELTG 681

Query: 711 LQPTNLTLEITESRIVDNDPVILHNMLELKKARIHIAIDDFGTGYSSLAYLHKLPFDCLK 770
           L  + L LE+TES ++ +    L+ +  L    + IAIDDFGTGYSSL+YL   P + LK
Sbjct: 682 LDSSFLELEVTESSLMYDFDEALNVLNTLSSLGLSIAIDDFGTGYSSLSYLKFFPVNTLK 741

Query: 771 IDREFVSQLNAYNIENSVVAAIVNMTRGFKVELVAEGIETQEQVDLLNQLGCPRGQGFLF 830
           ID+ FV  +        +V A++++ +  K++L+AEGIE  EQ+  L  L C +GQG++F
Sbjct: 742 IDQSFVKDMLGDEQSLDIVKAVIHLAKSLKLKLIAEGIEDAEQLQKLVALECEQGQGYMF 801

Query: 831 SKPMAYQDW 839
           SKP+  +++
Sbjct: 802 SKPLPLKEF 810