Pairwise Alignments

Query, 849 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 837 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  249 bits (635), Expect = 6e-70
 Identities = 157/480 (32%), Positives = 250/480 (52%), Gaps = 28/480 (5%)

Query: 385 LANGDWTASM---PKPGKIYETSLLVQA----------FIEM---TNSLKASFKALRSQL 428
           L NG W   +    K G IY   L + +          F+ +    ++ K S K L   +
Sbjct: 354 LTNGKWHGEIWNRRKSGAIYPEQLTISSMYGDDHQVRYFVAVFADISAQKQSEKELARLV 413

Query: 429 VYDSLTQLLSREGLVEHCHQI------PQLNGGLILIGIDKFRDINDSLGHHQADQLLVA 482
            +D LT+L +R  L  +  Q        +    LI I +D F+ INDS GH   D +LV 
Sbjct: 414 YHDPLTKLPNRMMLSANLEQELRHAAREETELALIFIDVDLFKHINDSYGHVTGDAILVE 473

Query: 483 IAQRLKVTFPEPALIARIGGDEFAIYLPDVNQQDDLKSVATDILKLFASPFSMPSD-NIA 541
           +A+RL     E A +AR+G DEF   LP V   D +  + + + + F +PF +  + ++ 
Sbjct: 474 VARRLGQKLGEEATLARLGSDEFIAVLPHVESDDSVSLMVSRLREAFDAPFLLDDEGSVR 533

Query: 542 VNVSIGIVYL--EEPNMTVWLRNGSIALSNAKAE-HTHISFYSPEMANASRKRMLMVTQI 598
           +  S+G+     +  +    LRN   A+  AKA    + +FY+  +  AS + + + + +
Sbjct: 534 LTASMGVAIYPGDGESGDTLLRNADTAMHRAKANGRNNYAFYTQSLTLASVEHLKLQSAL 593

Query: 599 KLALDNQEFVPFYQPIVDLNSGEVLGAEALARWISPEFGLIPPMDFIPIAEESGLINAIG 658
             A++   F   YQP + L +G+ +G EAL RW  P+ G I P  FIP+AE  GLIN IG
Sbjct: 594 HDAINKDAFYLVYQPKLALGTGQCVGFEALLRWEDPQLGTISPAIFIPVAENIGLINEIG 653

Query: 659 EQILRQACADTVRGIAENKWPSTFHMHVNLSVNQLSHPDFIAQLHSVLDESGLQPTNLTL 718
             +L+QA     + +AE K      + VN++  QL    F AQ+  VLDE+GL P  L L
Sbjct: 654 LWVLKQAATQGAQWLAEGK--RFGRISVNVAGPQLQQKQFCAQVKRVLDEAGLPPEYLEL 711

Query: 719 EITESRIVDNDPVILHNMLELKKARIHIAIDDFGTGYSSLAYLHKLPFDCLKIDREFVSQ 778
           E+TES ++ +   ++  + +L +  + +++DDFGTGYSSL YL +LP   LKID+ F+  
Sbjct: 712 EVTESCMMSDPLAVIEVLKQLGELGVELSVDDFGTGYSSLNYLKRLPIHKLKIDQSFIRD 771

Query: 779 LNAYNIENSVVAAIVNMTRGFKVELVAEGIETQEQVDLLNQLGCPRGQGFLFSKPMAYQD 838
           +       ++  A++ +     + ++AEG+ET EQ   L   GC + QG+L+SKP   ++
Sbjct: 772 IPRDGNNTAIAKAVIALGHALNLCIIAEGVETPEQAAFLEAAGCDQAQGYLYSKPRMVEE 831