Pairwise Alignments

Query, 849 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1094 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  247 bits (630), Expect = 3e-69
 Identities = 144/421 (34%), Positives = 236/421 (56%), Gaps = 15/421 (3%)

Query: 430  YDSLTQLLSREGLVEHCHQIPQL------NGGLILIGIDKFRDINDSLGHHQADQLLVAI 483
            YD+LT L +R+       Q+ QL      +  ++ I +D+F+ IND  GH   D+LL   
Sbjct: 660  YDALTNLPNRQLYTSRLSQMLQLAEQRCCSVAVLFIDLDRFKYINDIYGHAVGDELLQVA 719

Query: 484  AQRLKVTFPEPALIARIGGDEFAIYLPDVNQQDDLKSVATDILKLFASPFSMPSDNIAVN 543
            A RL+    +   +AR+ GDEF + +     Q +++  A +IL+  +SPF +  + + ++
Sbjct: 720  AARLEALLEQHDFVARLSGDEFVVVMGHTKHQGEIEQRAQNILQHLSSPFGINRNELLIS 779

Query: 544  VSIGIVYLEE--PNMTVWLRNGSIALSNAKAEHTH-ISFYSPEMANASRKRMLMVTQIKL 600
             S+GI        ++ V  RN   A+  AK +  +   ++SP+M N    R+ +   ++ 
Sbjct: 780  ASVGISCYPSNGTSVEVLTRNAETAMYQAKQDGRNCFGYFSPDMNNNMLARITLEQSLRS 839

Query: 601  ALDNQEFVPFYQPIVDLNSGEVLGAEALARWISPEFGLIPPMDFIPIAEESGLINAIGEQ 660
            A+   EF   YQPIVD +SGE +  EAL RW  P+ GL+PP +FIPIAEE+GLI  IGE 
Sbjct: 840  AVLQHEFCLHYQPIVDTSSGEGVALEALLRWRHPQRGLVPPDEFIPIAEETGLIEPIGEW 899

Query: 661  ILRQACADTVRGIAENKWPSTFHMHVNLSVNQLSHPD---FIAQLHSVLDESGLQPTNLT 717
            +++QA  D  +  ++       +M +N+S  QL+H D   F   L+ +L +  + P  + 
Sbjct: 900  VIQQALRDLRQCHSQG---IMINMAINVSGRQLAHGDPSHFACMLNGLLQKYDVAPQYVH 956

Query: 718  LEITESRIVDNDPVILHNMLELKKARIHIAIDDFGTGYSSLAYLHKLPFDCLKIDREFVS 777
            +EITES ++ +  + L  +  ++   + I +DDFGTGYSSL+YL + P   +KID+ FV 
Sbjct: 957  IEITESILMADTELSLKALTAIRHLGVEIYLDDFGTGYSSLSYLKQFPISVIKIDKSFVD 1016

Query: 778  QLNAYNIENSVVAAIVNMTRGFKVELVAEGIETQEQVDLLNQLGCPRGQGFLFSKPMAYQ 837
             +     + +++ AI+ M +   + LVAEG+E++ Q   L  LGC   QG+L +KPM  +
Sbjct: 1017 NMLEDRADANLIKAIITMGQSLDMRLVAEGVESEPQRSFLQGLGCDFVQGYLVAKPMPLK 1076

Query: 838  D 838
            +
Sbjct: 1077 E 1077