Pairwise Alignments

Query, 849 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1422 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  243 bits (621), Expect = 4e-68
 Identities = 156/440 (35%), Positives = 238/440 (54%), Gaps = 16/440 (3%)

Query: 402  ETSLLVQAFIEMTNSLKASFKALRSQLVYDSLTQLLSREGLVEHCHQI--PQLNGGLILI 459
            E S  V  F +++   K   + LR     D LT L +R  L      +   ++N  L+++
Sbjct: 965  ELSHYVGVFSDISRR-KQQEEELRKLTNNDLLTGLPNRSNLQVTLGNLVNKEINHALMVL 1023

Query: 460  GIDKFRDINDSLGHHQADQLLVAIAQRLKVTFPEPALIARIGGDEFAIYLPDVNQQDDLK 519
             +D F+ INDSLGH   D+LL  ++ R+K + P+   I R+GGDEFAI L   +      
Sbjct: 1024 DLDNFKRINDSLGHQVGDKLLKLVSVRIKSSVPKNTNIYRLGGDEFAIVLDKTSDILASA 1083

Query: 520  SVATDILKLFASPFSMPSDNIAVNVSIGIVYL--EEPNMTVWLRNGSIALSNAKAEHTHI 577
            ++A  I+  F + + + ++ + + VS+GIV    +E N    LR   IA+ +AK+   + 
Sbjct: 1084 AIAGRIVDAFNTVYEIDNEQLVLGVSVGIVLYPDDEQNEQALLRKADIAMYHAKSAGGNC 1143

Query: 578  -SFYSPEMANASRKRMLMVTQIKLALDNQEFVPFYQPIVDLNSGEVLGAEALARWISPEF 636
              FYS  +   + K++     I+  L    F  +YQP VDL  G V G EAL R   P  
Sbjct: 1144 YQFYSESLNEHAIKQLETENLIREGLKEDLFEVYYQPKVDLKHGHVAGMEALVRLNHPTL 1203

Query: 637  GLIPPMDFIPIAEESGLINAIGEQILRQACADTVRGIAENKWPSTF----HMHVNLSVNQ 692
            GLIPP DFIP+AEE+GLI  IGE +LR+AC       A  KW         + VNLS  Q
Sbjct: 1204 GLIPPNDFIPLAEENGLIVEIGEIVLRKAC------FAAQKWREQGLFKGRVAVNLSSRQ 1257

Query: 693  LSHPDFIAQLHSVLDESGLQPTNLTLEITESRIVDNDPVILHNMLELKKARIHIAIDDFG 752
             + PD   ++ S+L  + L  ++L LEITE  ++    + +  M +L K  + +A+DDFG
Sbjct: 1258 FALPDLQQRIESILRLTQLPASHLELEITEGTVIKQPEMAITVMQQLAKMGVSLALDDFG 1317

Query: 753  TGYSSLAYLHKLPFDCLKIDREFVSQLNAYNIENSVVAAIVNMTRGFKVELVAEGIETQE 812
            TGYSSL+YL + P   LKID+ FV  ++  + +  +V +I+ +     + +V EG+E   
Sbjct: 1318 TGYSSLSYLKRFPIHTLKIDKAFVDDIDKSDRDLKMVDSIITIAHNMGLSVVGEGVEQAA 1377

Query: 813  QVDLLNQLGCPRGQGFLFSK 832
            Q+++L  L C   QG++FSK
Sbjct: 1378 QLNILRALNCEEIQGYIFSK 1397