Pairwise Alignments

Query, 849 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1515 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  265 bits (676), Expect = 2e-74
 Identities = 167/453 (36%), Positives = 250/453 (55%), Gaps = 21/453 (4%)

Query: 402  ETSLLVQAFIEMTNSLKASFKALRSQLVYDSLTQLLSREGLVEHC-HQIPQLNGG----- 455
            ETS  V  F ++T   KA  + LR    +D+LT L +R    +   H I Q +       
Sbjct: 1057 ETSHFVAVFTDITERKKAE-EDLRFLASFDTLTGLPNRTLFQDRLNHAISQAHRSNNIVA 1115

Query: 456  LILIGIDKFRDINDSLGHHQADQLLVAIAQRLKVTFPEPALIARIGGDEFAIYLPDVNQQ 515
            L+ + +D+F+ INDS+GHH  D LL A+A RL+    E   +AR+GGDEF I L  V + 
Sbjct: 1116 LLFLDLDRFKHINDSMGHHIGDLLLKAVAHRLQSAVREGDTVARLGGDEFTIILEGVAKT 1175

Query: 516  DDLKSVATDILKLFASPFSMPSDNIAVNVSIGIVYL--EEPNMTVWLRNGSIALSNAKA- 572
                 ++  +LK F +PF +   ++ ++ SIGI     +  ++   ++    A+ +AKA 
Sbjct: 1176 KAATLISEKVLKAFQAPFLLDDKSLNISTSIGISLYPNDAKDVDSLIKFADTAMYHAKAL 1235

Query: 573  EHTHISFYSPEMANASRKRMLMVTQIKLALDNQEFVPFYQPIVDLNSGEVLGAEALARWI 632
               +  FY+ ++   + + M + T +K A+ + E    YQP   L +G + G EAL RW 
Sbjct: 1236 GRNNFQFYTNKLNEMATRHMQLETGLKQAISHNELSLVYQPKFCLRNGSLTGLEALLRWQ 1295

Query: 633  SPEFGLIPPMDFIPIAEESGLINAIGEQILRQACADTVRGIAENKWP----STFHMHVNL 688
              E G I P +FIP+AEE+G+IN IG  ++ Q+C          +W     S   M VNL
Sbjct: 1296 HSELGPISPAEFIPLAEETGMINQIGHWVINQSCQQLA------EWNELGFSDISMAVNL 1349

Query: 689  SVNQLSHPDFIAQLHSVLDESGLQPTNLTLEITESRIVDNDPVILHNMLELKKARIHIAI 748
            S  QL   D I+ +   L  SGL    L LE+TES I+ N    ++ + +LK   + IA+
Sbjct: 1350 SARQLK-ADIISTIEVALAVSGLPAKALELELTESMIMGNPQESVNILSKLKALGLTIAV 1408

Query: 749  DDFGTGYSSLAYLHKLPFDCLKIDREFVSQLNAYNIENSVVAAIVNMTRGFKVELVAEGI 808
            DDFGTGYSSL+YL + P D LKIDREFV  +     + ++ +AI+ +    ++ +VAEG+
Sbjct: 1409 DDFGTGYSSLSYLKRFPIDTLKIDREFVRDITNDPDDAAITSAIIALAHSLELNVVAEGV 1468

Query: 809  ETQEQVDLLNQLGCPRGQGFLFSKPMAYQDWPT 841
            ETQEQ++ L   GC + QGFL SKP++ QD  T
Sbjct: 1469 ETQEQLNFLALQGCDQVQGFLLSKPLSAQDCQT 1501