Pairwise Alignments

Query, 849 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1077 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  247 bits (630), Expect = 3e-69
 Identities = 156/426 (36%), Positives = 237/426 (55%), Gaps = 23/426 (5%)

Query: 427  QLVYDSLTQLLSREGL---VEHCHQIPQLNG---GLILIGIDKFRDINDSLGHHQADQLL 480
            Q  +D+LT L +R+     ++H  Q+ Q +     ++LI +D+F+ IND  GH   D LL
Sbjct: 632  QAHFDTLTGLPNRKLFNERLQHEIQLAQHDSRKLAILLIDLDQFKYINDVQGHATGDLLL 691

Query: 481  VAIAQRLKVTFPEPALIARIGGDEFAIYLPDVNQQDDLKSVATDILKLFASPFSMPSDNI 540
              +A+RL+    +  LIARIGGDEF + LP V  +  ++ +A+ I++  ++PF++    I
Sbjct: 692  QDVAKRLENIAGKNDLIARIGGDEFVLILPRVTNEFAIEHMASRIIETLSTPFNLNEREI 751

Query: 541  AVNVSIGIVYLEEPNMTV--WLRNGSIALSNAK-AEHTHISFYSPEMANASRKRMLMVTQ 597
             ++ S GI    E  + V    RN  +A+  AK A   +  +++  M  A   RM +  +
Sbjct: 752  QISASFGIGVYPEDGLDVSSLTRNTEMAMYQAKDAGRNNFKYFTSGMNQAMFARMELEQR 811

Query: 598  IKLALDNQEFVPFYQPIVDLNSGEVLGAEALARWISPEFGLIPPMDFIPIAEESGLINAI 657
            ++ A+   EF   YQPIV++ +G+V   EAL RW  P+ GLIPP  FI IAEE+GLI  +
Sbjct: 812  LRRAVAQDEFTLHYQPIVEMKTGKVCSVEALIRWQDPDLGLIPPDQFIGIAEETGLIEPM 871

Query: 658  GEQILRQACADTVRGIAENKWPSTFHMHVNLSVNQLSHP-------DFIAQLHSVLDESG 710
            GE +L QA  D        +W     + +N+++N  S          F   L    +   
Sbjct: 872  GEWVLNQAMHDL------RQWQQ-LGLQLNVAINVSSRQCVNARGMGFDQVLQECFNRHH 924

Query: 711  LQPTNLTLEITESRIVDNDPVILHNMLELKKARIHIAIDDFGTGYSSLAYLHKLPFDCLK 770
            + P N+ +EITES ++ +    L  +  +++    I IDDFGTGYSSL+YL K P   +K
Sbjct: 925  INPRNVHIEITESMLMGDASHCLSTLEAIRRLGSQIYIDDFGTGYSSLSYLKKFPISVIK 984

Query: 771  IDREFVSQLNAYNIENSVVAAIVNMTRGFKVELVAEGIETQEQVDLLNQLGCPRGQGFLF 830
            IDR FV    + N   ++V AIV M +  ++ELVAEGIET+ Q +LL  LGC   QG+L 
Sbjct: 985  IDRSFVENALSNNSNTNLVKAIVMMGQSLEMELVAEGIETEAQWNLLRDLGCHYAQGYLI 1044

Query: 831  SKPMAY 836
            SKP+ +
Sbjct: 1045 SKPLPF 1050