Pairwise Alignments

Query, 849 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 715 a.a., response regulator/sensory box/GGDEF domain/EAL domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  253 bits (646), Expect = 3e-71
 Identities = 163/452 (36%), Positives = 251/452 (55%), Gaps = 25/452 (5%)

Query: 402 ETSLLVQAFIEMTNSLKASFKALRSQLVYDSLTQLLSREGLVEHCHQI---PQLNGGLIL 458
           + S +V  F+++T  LK     +  Q  +D LT LL+R G+ +H  ++    Q++  L++
Sbjct: 268 QVSGIVGTFLDITE-LKRKEAQIVHQATHDELTGLLNRFGMRQHVDRLIVGGQMSFALLV 326

Query: 459 IGIDKFRDINDSLGHHQADQLLVAIAQRLKVTFPEPALIARIGGDEFAIYLPDVNQQDDL 518
           I +D F+ INDSLGH   D+LL   A+R+        ++ R GGDE+ + L +V+ +   
Sbjct: 327 IDLDDFKTINDSLGHALGDRLLHKAAERIVELVGSQGIVGRPGGDEYVVLLYNVDAEA-A 385

Query: 519 KSVATDILKLFASPFSMPSDNIAVNVSIGI-VYLEEPNMTVWL-RNGSIALSNAKAEH-T 575
            ++A  IL +F    S+    + +++SIGI VY E+ +    L +   IA+  AK E   
Sbjct: 386 HAMARRILDIFTDSLSVSGHEVYISLSIGIAVYPEDGDDAANLFKCCDIAMYRAKEEGGA 445

Query: 576 HISFYSPEMANASRKRMLMVTQIKLALDNQEFVPFYQPIVDLNSGEVLGAEALARWISPE 635
               Y   M +    R+ +   ++ AL+  EFV  YQP VD+ +G V G EAL RW+  +
Sbjct: 446 RAQRYLAAMQDVITSRLALEKNLRKALERGEFVLHYQPKVDIRTGAVTGMEALVRWVRDD 505

Query: 636 FGLIPPMDFIPIAEESGLINAIGEQILRQACADTVRGIAENKWPSTF---HMHVNLSVNQ 692
             ++PP DFIP+AE++GLI A+GE +LR+AC         + W   F    M VN+S  Q
Sbjct: 506 GTIVPPQDFIPVAEKTGLIVALGEFVLREACRQM------HAWQKRFGRLKMAVNISARQ 559

Query: 693 LSH--PDFIAQLHSVLDESGLQPTNLTLEITESRIVDNDPVILHNMLELKKARIHIAIDD 750
                PD +A   S L ++GL P  L LEITE+ ++ +  + +  +  L    I +AIDD
Sbjct: 560 FQPGLPDTVA---SALADAGLDPGLLELEITETTMMRDLALTVSVLERLTTGGIAVAIDD 616

Query: 751 FGTGYSSLAYLHKLPFDCLKIDREFVSQLNAYNIENSVVAAIVNMTRGFKVELVAEGIET 810
           FGTG+SSL YL   P   +KIDR FV  +     + ++V  +V+M R   + +VAEG+ET
Sbjct: 617 FGTGHSSLYYLKTFPISSIKIDRSFVRDIPNDETDATIVTTVVSMGRNLGIGIVAEGVET 676

Query: 811 QEQVDLLNQLGCPRGQGFLFSKPM---AYQDW 839
           + Q+D L  L CP  QG+ FSKP+   A++ W
Sbjct: 677 EAQLDFLRSLECPEVQGYYFSKPLPPHAFEAW 708