Pairwise Alignments

Query, 849 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1433 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  247 bits (630), Expect = 4e-69
 Identities = 157/440 (35%), Positives = 239/440 (54%), Gaps = 16/440 (3%)

Query: 402  ETSLLVQAFIEMTNSLKASFKALRSQLVYDSLTQLLSREGLVEHCHQI--PQLNGGLILI 459
            E S  V  F +++   K   + LR     D LT L +R  L      +   ++   L+++
Sbjct: 976  ELSHYVGVFSDISRR-KQQEEELRKLTNNDLLTGLPNRSNLQVTLGNLVNKEITHALMVL 1034

Query: 460  GIDKFRDINDSLGHHQADQLLVAIAQRLKVTFPEPALIARIGGDEFAIYLPDVNQQDDLK 519
             +D F+ INDSLGH   DQLL  ++ R+K   P+   I R+GGDEFAI L   +      
Sbjct: 1035 DLDNFKRINDSLGHQIGDQLLKLVSIRIKSILPKNTSIYRLGGDEFAIVLDKTSDISASA 1094

Query: 520  SVATDILKLFASPFSMPSDNIAVNVSIGIVYLEEPNMT--VWLRNGSIALSNAKAEHTHI 577
            ++A  +++ F + F + ++ + + VSIGIV+  E   +    LR   IA+ +AK+   + 
Sbjct: 1095 AIAGRVIEAFKTMFEIGNEQLVLGVSIGIVFYPEDEQSEQALLRKADIAMYHAKSAGGNC 1154

Query: 578  -SFYSPEMANASRKRMLMVTQIKLALDNQEFVPFYQPIVDLNSGEVLGAEALARWISPEF 636
              FYS  +   + K++ +   I+  L    F  +YQP VDL SG V G EAL R   P  
Sbjct: 1155 YQFYSESLNQHAIKQLEIENLIREGLKEDLFEVYYQPKVDLKSGHVAGMEALVRLNHPTR 1214

Query: 637  GLIPPMDFIPIAEESGLINAIGEQILRQACADTVRGIAENKWPSTF----HMHVNLSVNQ 692
            GLIPP DFIP+AEE+GLI  IGE +LR+AC       A  KW         + VNLS  Q
Sbjct: 1215 GLIPPNDFIPLAEENGLIIEIGEIVLRKAC------FAAQKWREQGLFKGRVAVNLSSRQ 1268

Query: 693  LSHPDFIAQLHSVLDESGLQPTNLTLEITESRIVDNDPVILHNMLELKKARIHIAIDDFG 752
             + PD   ++ S+L  + L  ++L LEITE  ++    + +  M +L K  + +A+DDFG
Sbjct: 1269 FALPDLQQRIESILRLTQLPASHLELEITEGTVIKQPEMAITVMQQLAKMGVSLALDDFG 1328

Query: 753  TGYSSLAYLHKLPFDCLKIDREFVSQLNAYNIENSVVAAIVNMTRGFKVELVAEGIETQE 812
            TGYSSL+YL + P   LKID+ FV  ++  + +  +V +I+ +     + +V EG+E   
Sbjct: 1329 TGYSSLSYLKRFPIHTLKIDKAFVDDIDKSDRDLKMVDSIITIAHNMGLSVVGEGVEQAA 1388

Query: 813  QVDLLNQLGCPRGQGFLFSK 832
            Q+++L  L C   QG++FSK
Sbjct: 1389 QLNILRALNCEEIQGYIFSK 1408