Pairwise Alignments

Query, 849 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1077 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  244 bits (622), Expect = 3e-68
 Identities = 154/428 (35%), Positives = 234/428 (54%), Gaps = 23/428 (5%)

Query: 427  QLVYDSLTQLLSREGL---VEHCHQIPQLNG---GLILIGIDKFRDINDSLGHHQADQLL 480
            Q  +D+LT L +R+     ++H  Q+ Q +     ++LI +D+F+ IND  GH   D LL
Sbjct: 633  QANFDTLTGLPNRKLFNERLQHEIQLAQHDSRKLAILLIDLDQFKYINDVQGHATGDLLL 692

Query: 481  VAIAQRLKVTFPEPALIARIGGDEFAIYLPDVNQQDDLKSVATDILKLFASPFSMPSDNI 540
              +A+RL+    +   +ARIGGDEF + LP V  +  ++ +A+ I++  A+PF++    I
Sbjct: 693  QDVAKRLENIAGKNDFVARIGGDEFVLILPRVTNEFAIEHMASRIIETLATPFNLNEREI 752

Query: 541  AVNVSIGIVYLEEPNMTV--WLRNGSIALSNAK-AEHTHISFYSPEMANASRKRMLMVTQ 597
             ++ S GI    E  + V    RN  +A+  AK A   +  +++  M  A   RM +  +
Sbjct: 753  QISASFGIGVYPEDGLDVSSLTRNTEMAMYQAKDAGRNNFKYFTSGMNQAMFARMELEQR 812

Query: 598  IKLALDNQEFVPFYQPIVDLNSGEVLGAEALARWISPEFGLIPPMDFIPIAEESGLINAI 657
            ++ A+   EF  FYQPIVD+ +G++   EAL RW  P+ GLIPP  FI IAEE+GLI  +
Sbjct: 813  LRRAVAQDEFTLFYQPIVDMKTGQICSVEALIRWQDPDLGLIPPDQFIAIAEETGLIEPM 872

Query: 658  GEQILRQACADTVRGIAENKWPSTFHMHVNLSVNQLSHP-------DFIAQLHSVLDESG 710
            GE +L QA  D        +W     +++N+++N  S          F   L    +   
Sbjct: 873  GEWVLNQAMHDL------RQWQH-MGLNLNVAINVSSRQCINTRGIGFDQVLQECFNRHH 925

Query: 711  LQPTNLTLEITESRIVDNDPVILHNMLELKKARIHIAIDDFGTGYSSLAYLHKLPFDCLK 770
            + P N+ +EITES ++ +    L  +  ++     I IDDFGTGYSSL+YL K P   +K
Sbjct: 926  INPRNVHIEITESMLMGDASHCLSTLESIRHLGSQIYIDDFGTGYSSLSYLKKFPISVIK 985

Query: 771  IDREFVSQLNAYNIENSVVAAIVNMTRGFKVELVAEGIETQEQVDLLNQLGCPRGQGFLF 830
            IDR FV          ++V AIV M +  ++ELVAEGIET+ Q   L  LGC   QG+L 
Sbjct: 986  IDRSFVEHALENCSNANLVKAIVMMGQSLEMELVAEGIETEAQWQFLRDLGCHYAQGYLL 1045

Query: 831  SKPMAYQD 838
            SKP+ + +
Sbjct: 1046 SKPLPFDE 1053