Pairwise Alignments

Query, 354 a.a., nitrogen regulation protein NR(II) from Vibrio cholerae E7946 ATCC 55056

Subject, 678 a.a., Sensory box histidine kinase from Pseudomonas fluorescens FW300-N2E2

 Score = 92.4 bits (228), Expect = 3e-23
 Identities = 98/383 (25%), Positives = 168/383 (43%), Gaps = 52/383 (13%)

Query: 10  TIINNQVTSVLILDESLMIRYANPAAEQLFSQSAKRLMHQSLNHLVQHSSLDLQLLTQPL 69
           +II++  ++++ LDE L +   N  A  L        ++Q +    +     L  L Q +
Sbjct: 291 SIIDSMPSALIALDEQLYVTQWNQEASALSGTRLDEALNQPIFLAFEPLKPYLPQLKQTV 350

Query: 70  QSGQSITDSDVTLVIDSKPLMLEVTVSPISWHKELLLLAEMRTIGQQRRLTQELNQHAQQ 129
           +         VT   D +     +T  P+       ++  +  I Q+  L + + Q  + 
Sbjct: 351 EQHTVAKIERVTWTKDDEARHYALTFYPLMGGAGRGVVIRIDDITQRLSLEEMMVQSEKM 410

Query: 130 QAAKLLVRGLAHEIKNPLGGLRGAAQLLERMLPD--PALMEYTQII---IEQADRL---R 181
            +   L  G+AHEI NPLG +    Q + R L    P  +E  +++   +E+ +R    R
Sbjct: 411 LSVGGLAAGMAHEINNPLGAILHNVQNIRRRLSPELPKNLEQAELLGIQLEEVNRYLQGR 470

Query: 182 GLVDRLLGPQRPGEKKWENLHLILEKVRQLVELEAGANL--------------------- 220
            +   L G Q+ G +  + +  +L   R+     A  +L                     
Sbjct: 471 EIPQLLDGIQQAGARAAKIVTHMLSFSRRSTRQMAPCDLPALIDQAVEIAGNDFDLAIGF 530

Query: 221 -----VFERDYDPSLPNILMDTDQIEQALLNIVSNAAQIL----TNQTHGVITLRTRTVH 271
                   R +DP+L  +    +++EQ LLN++ NAAQ +     +   G I LRTR   
Sbjct: 531 DFKGQAITRQFDPNLGPVPGTANELEQVLLNLLKNAAQAIHQRQDDSEPGRIILRTRL-- 588

Query: 272 QANIHGQRHKLVASIEIIDNGPGIPPELQDTLFYPMVSGRE--GGTGLGLSISQNLI-DQ 328
                   +   A I++ DNG G+   ++   F P  + +E   GTGLGLS+S  +I + 
Sbjct: 589 --------NPPWAEIQVEDNGIGMSENVRKRTFEPFFTTKEIGQGTGLGLSVSYFIITNN 640

Query: 329 HQGKIEVQSWPGR-TVFTIYLPI 350
           H+G++EVQS PG+ T FT+ LP+
Sbjct: 641 HKGQMEVQSAPGQGTCFTLRLPL 663