Pairwise Alignments

Query, 354 a.a., nitrogen regulation protein NR(II) from Vibrio cholerae E7946 ATCC 55056

Subject, 529 a.a., Two-component sensor PilS from Pseudomonas fluorescens FW300-N2E2

 Score =  100 bits (248), Expect = 1e-25
 Identities = 95/354 (26%), Positives = 155/354 (43%), Gaps = 44/354 (12%)

Query: 7   LSQTIINNQVTSVLILDESLMIRYANPAAEQLFSQSAKRLMHQSLNHLVQHSSLDLQLLT 66
           L+  I+    T +L+LD    ++ AN +A  L        +H  +   +      L    
Sbjct: 197 LNALILQRMRTGILVLDRERRVQLANESALNLLG------IHDLVGQRIDDYCTALVERL 250

Query: 67  QPLQSGQSITDSDVTLVIDSKPLMLEVTVSPISWHKELLLLAEMRTIGQQRRLTQELNQH 126
           Q   +  S+    +T  +    L L+ +   +  + +  LL  +  + Q  +  Q+L   
Sbjct: 251 QLWLNNPSLRPPSLT--VTGTGLTLQPSFIALGHYDQQQLLVFLEDLAQVAQQAQQLKLA 308

Query: 127 AQQQAAKLLVRGLAHEIKNPLGGLRGAAQLL-ERMLPDPALMEYTQIIIEQADRLRGLVD 185
           +  +    L  G+AHEI+NPLG +  AAQLL E    + A    TQII + + R+  +++
Sbjct: 309 SLGR----LTAGIAHEIRNPLGAISHAAQLLRESEELNNADRRLTQIIQDHSQRMNRVIE 364

Query: 186 RLLGPQRPGEKKWENLHL---ILEKVRQLVELEAGANLVFERDYDPSLPNILMDTDQIEQ 242
            +L   R  +   + L L   + + VRQ  E  A  +       DP     LMD DQ+ Q
Sbjct: 365 NVLQLSRRQQTTPQRLDLRTWLDQFVRQARESMA-EHQHLHLSIDPGDYTTLMDPDQLTQ 423

Query: 243 ALLNIVSNAAQILTNQTHGVITLRTRTVHQANIHGQR----------HKLVASIEIIDNG 292
            L N++ NA +                 H A  H Q           H  +++++IIDNG
Sbjct: 424 VLDNLLRNAWR-----------------HSAMAHEQAEAWLKLFIDPHSQLSTLDIIDNG 466

Query: 293 PGIPPELQDTLFYPMVSGREGGTGLGLSISQNLIDQHQGKIEVQSWPGRTVFTI 346
           PG+ PE Q  LF P  +    GTGLGL +S+ L + +Q +++ +   G   F I
Sbjct: 467 PGVTPEQQAHLFEPFFTTSSQGTGLGLYLSRELCESNQARLDFKPRQGGGCFRI 520