Pairwise Alignments

Query, 354 a.a., nitrogen regulation protein NR(II) from Vibrio cholerae E7946 ATCC 55056

Subject, 361 a.a., Nitrogen regulation protein NtrB (EC 2.7.13.3) from Pseudomonas fluorescens FW300-N2E2

 Score =  313 bits (803), Expect = 3e-90
 Identities = 168/354 (47%), Positives = 237/354 (66%), Gaps = 4/354 (1%)

Query: 1   MSVSAELSQTIINNQVTSVLILDESLMIRYANPAAEQLFSQSAKRLMHQSLNHLVQHSSL 60
           M++S  L + +++N  T+ ++LD  L + Y NPAAE L + S +R   Q ++ L   S+ 
Sbjct: 1   MTISDALHRLLLDNLTTATILLDAELRLEYMNPAAEMLLAVSGQRSHGQFISELFTESAE 60

Query: 61  DLQLLTQPLQSGQSITDSDVTLV-IDSKPLMLEVTVSPISWHKELLLLAEMRTIGQQRRL 119
            L  L Q ++     T  +  L  +  + L ++  V+PI  +   LLL E+    +  R+
Sbjct: 61  ALNSLRQAVEQAHPFTKREAMLTALTGQTLTVDYAVTPILNNGATLLLLEVHPRDRLLRI 120

Query: 120 TQELNQHAQQQAAKLLVRGLAHEIKNPLGGLRGAAQLLERMLPDPALMEYTQIIIEQADR 179
           T+E  Q ++Q+ +K+LVRGLAHEIKNPLGG+RGAAQLL R LP+ +L +YT +IIE+ADR
Sbjct: 121 TKEEAQLSKQETSKMLVRGLAHEIKNPLGGIRGAAQLLARELPEESLKDYTNVIIEEADR 180

Query: 180 LRGLVDRLLGPQRPGEKKWENLHLILEKVRQLVELEAGANLVFERDYDPSLPNILMDTDQ 239
           LR LVDR+LG  +       N+H +LE+V  LVE E+   +   RDYDPS+P++L+D +Q
Sbjct: 181 LRNLVDRMLGSNKLPSLAMCNVHEVLERVSSLVEAESQGCITLVRDYDPSIPDVLIDREQ 240

Query: 240 IEQALLNIVSNAAQILTNQTH---GVITLRTRTVHQANIHGQRHKLVASIEIIDNGPGIP 296
           + QA+LNIV NA Q +++Q     G I+LRTR + Q  I   RH+LV  IEIIDNGPGIP
Sbjct: 241 MIQAVLNIVRNAMQAISSQNELRLGRISLRTRAMRQFTIGHVRHRLVTKIEIIDNGPGIP 300

Query: 297 PELQDTLFYPMVSGREGGTGLGLSISQNLIDQHQGKIEVQSWPGRTVFTIYLPI 350
            ELQ+T+F+PMVSGR  GTGLGL+I+QN+I QHQG IE +S PG T F+I+LP+
Sbjct: 301 AELQETIFFPMVSGRPDGTGLGLAITQNIISQHQGLIECESHPGHTTFSIFLPL 354