Pairwise Alignments

Query, 354 a.a., nitrogen regulation protein NR(II) from Vibrio cholerae E7946 ATCC 55056

Subject, 530 a.a., Sensor protein PilS from Pseudomonas syringae pv. syringae B728a

 Score = 99.0 bits (245), Expect = 3e-25
 Identities = 92/342 (26%), Positives = 148/342 (43%), Gaps = 34/342 (9%)

Query: 7   LSQTIINNQVTSVLILDESLMIRYANPAAEQLFSQSAKRLMHQSLNHLVQHSSLDL---- 62
           L+  I+    T +L+LD +  +  AN  A  L  Q       Q +  ++   S  L    
Sbjct: 197 LNALILQRMRTGILVLDANHQVLLANQGALHLLGQE------QLVGQIIDTCSPQLVERL 250

Query: 63  -QLLTQPLQSGQSITDSDVTLVIDSKPLMLEVTVSPISWHKELLLLAEMRTIGQQRRLTQ 121
            Q L  P+   +SIT + V LV+         T++     + L+ L ++  I  Q     
Sbjct: 251 RQWLVNPIMVPRSITTAPVGLVLQPS----FATLNRGDQRQTLVFLEDLSQIAHQA---- 302

Query: 122 ELNQHAQQQAAKLLVRGLAHEIKNPLGGLRGAAQLL-ERMLPDPALMEYTQIIIEQADRL 180
              Q  +  A   L  G+AHEI+NPLG +  AAQLL E      A     QII EQ+ R+
Sbjct: 303 ---QQLKLAALGRLTAGIAHEIRNPLGAVSHAAQLLNESEELSAADRRLGQIIHEQSGRI 359

Query: 181 RGLVDRLLGPQRPGEKKWENLHLILEKVRQLVELEAGA--NLVFERDYDPSLPNILMDTD 238
             +++ +L   R  E + E L L       + E  + A  N     D  P      MD+ 
Sbjct: 360 DRVIENVLQLSRRREAQPELLDLKTWLEHFVAEFRSSAAPNQKIHVDISPGTLTTRMDSG 419

Query: 239 QIEQALLNIVSNAAQIL-TNQTHGVITLRTRTVHQANIHGQRHKLVASIEIIDNGPGIPP 297
           Q+ Q + N+V N  +    N     + L+        +H  +   + ++E++D+GPG+  
Sbjct: 420 QLTQIMTNLVQNGLRYSGKNHPSAQVWLK--------LHNDQKSDLPTLEVLDDGPGVSE 471

Query: 298 ELQDTLFYPMVSGREGGTGLGLSISQNLIDQHQGKIEVQSWP 339
           +    +F P  +    GTGLGL +S+ L + +Q  +E    P
Sbjct: 472 QHLSKMFEPFFTTESKGTGLGLYLSRELCESNQAHLEYAPRP 513