Pairwise Alignments

Query, 354 a.a., nitrogen regulation protein NR(II) from Vibrio cholerae E7946 ATCC 55056

Subject, 950 a.a., GAF domain-containing protein from Synechocystis sp000284455 PCC 6803

 Score = 92.0 bits (227), Expect = 6e-23
 Identities = 93/372 (25%), Positives = 167/372 (44%), Gaps = 52/372 (13%)

Query: 11  IINNQVTSVLILDESLMIRYANPAAEQLFSQSAKRLMHQSLNHLVQHSSLDLQLLTQPLQ 70
           I++N    +L++D    I   NPA   +F      L+   ++     +    QLL +P +
Sbjct: 588 IVDNLADGLLVIDLFGRITRYNPALLAMFDLEGLELLGAGVDAYFPETLN--QLLAKPER 645

Query: 71  SGQSITDSDVTLVIDSKPLMLEVTVSPISWHKELLLLAEMRTIGQQRRLTQELNQHAQQQ 130
             Q +  +DV L   S+    +  ++ I+ H+      +   +G    +    ++   ++
Sbjct: 646 EEQKLVTADVEL---SQGRQGQALITSITSHENGCEYPQC--LGAVIMIRDVTHEREVER 700

Query: 131 AAKLLVRGLAHEIKNPLGGLRGAAQLL----------ERMLPDPALMEYTQ-------II 173
                +  ++HE++ PL  + G A ++          E  L  P L + T+       II
Sbjct: 701 MKTDFLATVSHELRTPLTSILGFATVIQDKLNRVIIPELDLAQPHLGKATERVMRNLAII 760

Query: 174 IEQADRLRGLVDRLL--GPQRPGEKKWEN----LHLILEKVRQLVELEAGA-NLVFERDY 226
             +A RL  L++ +L       G++ W+     +  I+E+    +  +A   N+  + D 
Sbjct: 761 ESEAQRLTVLINDVLDIAKMEAGQESWQEQPCAIGPIIERAIATITPQAQKKNISLQGDL 820

Query: 227 DPSLPNILMDTDQIEQALLNIVSNAAQILTNQTHGVITLRTRTVHQANIHGQRHKLVASI 286
           +P LP+ + D ++I Q +LN++SNA +       G+IT R+            H+    +
Sbjct: 821 EPGLPDFIGDENRILQVVLNLLSNAVKFTPK---GLITARSHF----------HQNYLWV 867

Query: 287 EIIDNGPGIPPELQDTLFYPMVSG-------REGGTGLGLSISQNLIDQHQGKIEVQSWP 339
           EIID+GPGI P  Q+ +F P   G       +  GTGLGL I + +++ H G I V S  
Sbjct: 868 EIIDHGPGIHPADQEKIFEPFQQGGGDVLTDKPQGTGLGLPICKKIVEHHGGTIGVNSSL 927

Query: 340 GR-TVFTIYLPI 350
           GR + F   LP+
Sbjct: 928 GRGSTFYFSLPV 939