Pairwise Alignments

Query, 354 a.a., nitrogen regulation protein NR(II) from Vibrio cholerae E7946 ATCC 55056

Subject, 708 a.a., sensor histidine kinase (RefSeq) from Shewanella amazonensis SB2B

 Score = 90.1 bits (222), Expect = 2e-22
 Identities = 75/222 (33%), Positives = 113/222 (50%), Gaps = 16/222 (7%)

Query: 135 LVRGLAHEIKNPLGGLRGAAQLLERMLPDPA--LMEYTQIIIEQADRLRGLVDRLLGPQR 192
           L  G+AHEI NP   + G  +LL   L D A  + E   ++I+Q  R+  ++  LL   R
Sbjct: 471 LTAGIAHEINNPTAVILGNMELLRSELGDKAGQVEEEIDLVIQQVGRISTIIRSLLQYSR 530

Query: 193 PGEKKWE-NLHLILEKVRQLVELEAGA----NLVFERDYDPSLPNILMDTDQIEQALLNI 247
           PGE      +H I   + +++ L   +     +V  ++ + S P + ++  Q+ Q L+N+
Sbjct: 531 PGEFNAPLEMHQITPIIEEMLVLVRHSIKKQEVVLHQELNASCP-VQINRPQLLQVLINL 589

Query: 248 VSNAAQILTNQTHGVITLRTRTVHQANIHGQRHKLVASIEIIDNGPGIPPELQDTLFYPM 307
           V NAA  +  +  G I +RT      +   Q   +   IEI D G GI PE    +F P 
Sbjct: 590 VVNAAHAMDGK--GRIWIRTY-----DWVVQDEPVGVKIEIEDEGCGIAPEQLGRIFDPF 642

Query: 308 VSGREGGTGLGLSISQNLIDQHQGKIEVQSWPGR-TVFTIYL 348
            + R  GTGLGLS+S  +I +  G IEV S  G+ T+FTI L
Sbjct: 643 YTTRPDGTGLGLSLSYGIIKRIGGTIEVTSTLGKGTLFTIGL 684