Pairwise Alignments

Query, 354 a.a., nitrogen regulation protein NR(II) from Vibrio cholerae E7946 ATCC 55056

Subject, 366 a.a., Signal transduction histidine kinase, nitrogen specific, NtrB (NCBI) from Rhodospirillum rubrum S1H

 Score =  162 bits (410), Expect = 1e-44
 Identities = 107/349 (30%), Positives = 187/349 (53%), Gaps = 10/349 (2%)

Query: 10  TIINNQVTSVLILDESLMIRYANPAAEQLFSQSAKRLMHQSLNHLVQHSSLDLQLLTQPL 69
           T+++   ++V+ +DE+  +++ N A EQ+F  +   L   +L+ L+        L+ +  
Sbjct: 20  TVLSAIASAVICVDEADRVQFVNAAGEQMFESTWALLRGMALSDLIPPDCPIFGLMEKVR 79

Query: 70  QSGQSITDSDVTLVID-SKPLMLEVTVSPISWHKELLLLAEMRTIGQQRRLTQELNQHAQ 128
           ++  + ++  V L    +    + V VSP++ ++  ++++ +  +    ++ Q+++    
Sbjct: 80  RNHSTFSEYGVQLDTPRTGQRTITVRVSPLAEYENWVVIS-LHELSMALKIGQQMSHRNA 138

Query: 129 QQAAKLLVRGLAHEIKNPLGGLRGAAQLLERMLPDPALMEYTQIIIEQADRLRGLVDRL- 187
            ++   +   LAHE+KNPL G+RGAAQLLE  LP+    +  ++II++ DR+  LVDR+ 
Sbjct: 139 ARSVTAMAALLAHEVKNPLSGIRGAAQLLEANLPEED-HQLVRLIIDETDRIVALVDRME 197

Query: 188 -LGPQRPGEKKWENLHLILEKVRQLVELEAGANLVFERDYDPSLPNILMDTDQIEQALLN 246
                 P  ++  N+H +LE VR + E      + F   YDPSLP +L   DQ+ Q  LN
Sbjct: 198 VFSDNMPLAREAVNIHRVLEHVRMVAENGFARGVRFVETYDPSLPAVLGSRDQLIQVFLN 257

Query: 247 IVSNAAQILTNQTHGVITLRTRTVHQANIH---GQRHKLVASIEIIDNGP-GIPPELQDT 302
           ++ NAA+ +     G I L T       +    G+   L   I + DNG  GI  +L+  
Sbjct: 258 LIKNAAEAI-GPGGGEIVLSTAYQQGLRLRVPGGEVTDLPLVISVRDNGTTGISEDLRGN 316

Query: 303 LFYPMVSGREGGTGLGLSISQNLIDQHQGKIEVQSWPGRTVFTIYLPIL 351
           LF P V+ +  G+GLGL +   +++ H G IE  S PGRTVFT+ LP++
Sbjct: 317 LFDPFVTTKPKGSGLGLPLVAKIVNDHGGIIEFDSVPGRTVFTVMLPMV 365