Pairwise Alignments

Query, 354 a.a., nitrogen regulation protein NR(II) from Vibrio cholerae E7946 ATCC 55056

Subject, 376 a.a., nitrogen regulation protein NtrB from Phaeobacter inhibens DSM 17395

 Score =  161 bits (408), Expect = 2e-44
 Identities = 115/337 (34%), Positives = 180/337 (53%), Gaps = 15/337 (4%)

Query: 21  ILDESLMIRYANPAAEQLFSQSAKRLMHQSL-NHLVQHSSLDLQLLTQPLQSGQSITDSD 79
           ++D    I   N A E   + S K L+ +++  H++   ++D + + +   +G  +  +D
Sbjct: 27  VIDPEARIEDVNSAGEGFLNTSRKALLGKAIWQHVIIAPAID-EAVARARDNGTPLFVND 85

Query: 80  VTLVIDSK-PLMLEVTVSPISW--HKELLLLAEMRTIGQQRRLTQELNQHAQQQAAKLLV 136
           + +    + PL   V V+ +     + L+LL+     G   RLTQ  +  +  Q+A  + 
Sbjct: 86  IDVGAPGRAPLQCNVQVARVQGVEGRMLILLSPRELAG---RLTQNHSAKSAAQSAIGMA 142

Query: 137 RGLAHEIKNPLGGLRGAAQLLERMLPDPALMEYTQIIIEQADRLRGLVDRL--LGPQRPG 194
             LAHEIKNPL G+ GAAQLL   L    L E T +I+ ++ R+  L++++   G     
Sbjct: 143 EMLAHEIKNPLAGITGAAQLLSMGLSGDDL-ELTDLIVSESRRIVKLLEQVEQFGNLSTL 201

Query: 195 EKKWENLHLILEKVRQLVELEAGANLVFERDYDPSLPNILMDTDQIEQALLNIVSNAAQI 254
             +  N+H +L++ R+   L  GA++    DYDPSLP    D DQ+ Q +LN++ NAA+ 
Sbjct: 202 AFQEVNIHDVLDRARRSALLGFGAHMTIIEDYDPSLPMAWGDGDQLLQVVLNLLKNAAEA 261

Query: 255 LTNQTHGVITLRTRTVHQANIH---GQRHKLVASIEIIDNGPGIPPELQDTLFYPMVSGR 311
             +   G I +RT   H   +    G    L   IEI D+GPG+P  ++D +F P VSGR
Sbjct: 262 -ADPGGGTIRIRTFYEHSFRLRRSDGSGKLLPLQIEISDDGPGLPEAIRDDIFDPFVSGR 320

Query: 312 EGGTGLGLSISQNLIDQHQGKIEVQSWPGRTVFTIYL 348
           E GTGLGL++   +I  HQG I V S PG+TVF + L
Sbjct: 321 ENGTGLGLALVSKIIADHQGWISVNSEPGQTVFRLSL 357