Pairwise Alignments

Query, 354 a.a., nitrogen regulation protein NR(II) from Vibrio cholerae E7946 ATCC 55056

Subject, 713 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  100 bits (248), Expect = 2e-25
 Identities = 85/246 (34%), Positives = 122/246 (49%), Gaps = 16/246 (6%)

Query: 111 RTIGQQRRLTQELNQHAQQQAAKLLVRGLAHEIKNPLGGLRGAAQLLERMLPDPA--LME 168
           R +       Q+L  + +  A   L  G+AHEI NP   + G  +LL+  L D A  + E
Sbjct: 447 RNVALLNETRQQLVTNEKLTALGELTAGIAHEINNPTAVILGNMELLKSELGDKAEDVEE 506

Query: 169 YTQIIIEQADRLRGLVDRLLGPQRPGE----KKWENLHLILEKVRQLVELEAGAN-LVFE 223
              I+IEQ  R+  ++  LL   RPGE     +   L  I+E++  LV        +V  
Sbjct: 507 EIDIVIEQVGRISTIIRSLLQYSRPGEFNAPLEMHQLTPIVEEMAILVRHSIKKQEVVLI 566

Query: 224 RDYDPSLPNILMDTDQIEQALLNIVSNAAQILTNQTHGVITLRTRTVHQANIHGQRHKLV 283
           +D + S P I ++  Q+ Q L+N+V NAA  +  Q  G I +RT    Q         + 
Sbjct: 567 QDLNASYP-IEVNRPQLLQVLINLVVNAAHAMDGQ--GRIWIRTYDWVQGG-----EPIG 618

Query: 284 ASIEIIDNGPGIPPELQDTLFYPMVSGREGGTGLGLSISQNLIDQHQGKIEVQSWPGR-T 342
             IE+ D G GIP E    +F P  + R+ GTGLGLS+S  +I +  G IEV S  G+ T
Sbjct: 619 VKIEVEDEGKGIPEEQLGRIFDPFYTTRQDGTGLGLSLSYGIIKRIGGTIEVSSTVGKGT 678

Query: 343 VFTIYL 348
           +FTI L
Sbjct: 679 LFTIGL 684