Pairwise Alignments

Query, 354 a.a., nitrogen regulation protein NR(II) from Vibrio cholerae E7946 ATCC 55056

Subject, 709 a.a., histidine kinase,HAMP domain-containing protein,histidine kinase from Dechlorosoma suillum PS

 Score = 93.6 bits (231), Expect = 1e-23
 Identities = 73/241 (30%), Positives = 125/241 (51%), Gaps = 11/241 (4%)

Query: 117 RRLTQELNQHAQQQAAKLLVRGLAHEIKNPLGGLRGAAQLLERMLPDPA--LMEYTQIII 174
           RR  Q+L  + +  A   L  G+AHEI NP+  ++G  +LL  +L + A  +    ++I 
Sbjct: 447 RRAQQQLVMNEKLTAIGELTAGVAHEINNPVAVIQGNLELLRDVLGEQAEPVRGEIRLID 506

Query: 175 EQADRLRGLVDRLLGPQRPGE----KKWENLHLILEKVRQLVELEAGANLVFERDYDPSL 230
           EQ  R+R +V RLL   RPG+     +  +++ ++     L         V       + 
Sbjct: 507 EQTQRIRAIVTRLLQFARPGDFAGYAEATDVNGVVADCLVLTRHNLNKAGVKVETRLEAC 566

Query: 231 PNILMDTDQIEQALLNIVSNAAQILTNQTHGVITLRTRTVHQAN-IHGQRHKLVASIEII 289
            N+ M+  +++Q L+N++ NA Q +     G +++ +R +   + I G+     A + + 
Sbjct: 567 CNVEMNRGELQQVLINLMMNAMQAMPQG--GTLSMESRDIGPGDAIPGEASFPGALLRVR 624

Query: 290 DNGPGIPPELQDTLFYPM-VSGREGGTGLGLSISQNLIDQHQGKIEVQSWPG-RTVFTIY 347
           D G GI P   D +F P   + ++ GTGLGLSIS  +I ++ G+I V+S PG  T FT++
Sbjct: 625 DTGHGIAPADLDRIFDPFFTTKKQEGTGLGLSISYAIIQRYGGRISVESAPGEHTTFTLW 684

Query: 348 L 348
           L
Sbjct: 685 L 685